Table of Contents

September 3, 2002; 99 (18)

FROM THE COVER

Commentaries

Commentary:
- Peng Liang
SAGE Genie: A suite with panoramic view of gene expression
PNAS 2002 99:11547-11548; published online before print August 23, 2002, doi:10.1073/pnas.192436299
- See companion article on page 11287 in issue 17 of volume 99
Commentary:
- Jonathan P. Stoye
An intracellular block to primate lentivirus replication
PNAS 2002 99:11549-11551; published online before print August 23, 2002, doi:10.1073/pnas.192449399
- See companion article on page 11920 in issue 18 of volume 99
- See companion article on page 11914 in issue 18 of volume 99
Commentary:
- J. Evan Sadler
A new name in thrombosis, ADAMTS13
PNAS 2002 99:11552-11554; published online before print August 23, 2002, doi:10.1073/pnas.192448999
- See companion article on page 11902 in issue 18 of volume 99
Commentary:
- Charles E. Samuel
Host genetic variability and West Nile virus susceptibility
PNAS 2002 99:11555-11557; published online before print August 21, 2002, doi:10.1073/pnas.202448899
- See companion article on page 9322 in issue 14 of volume 99
- See companion article on page 11311 in issue 17 of volume 99
Commentary:
- Clifford W. Morden
- and Alison R. Sherwood
Continued evolutionary surprises among dinoflagellates
PNAS 2002 99:11558-11560; published online before print August 23, 2002, doi:10.1073/pnas.192456999
- See companion article on page 11724 in issue 18 of volume 99
Commentary:
- Richard A. Jorgensen
RNA traffics information systemically in plants
PNAS 2002 99:11561-11563; published online before print August 23, 2002, doi:10.1073/pnas.192449099
- See companion article on page 11981 in issue 18 of volume 99
Commentary:
- Julian P. Whitelegge
Plant proteomics: blasting out of a MudPIT
PNAS 2002 99:11564-11566; published online before print August 23, 2002, doi:10.1073/pnas.192449199
- See companion article on page 11969 in issue 18 of volume 99
Commentary:
- Sheng Luan
Tyrosine phosphorylation in plant cell signaling
PNAS 2002 99:11567-11569; published online before print August 23, 2002, doi:10.1073/pnas.182417599
- See companion article on page 11963 in issue 18 of volume 99

Perspective

Perspective - Perspective:
- Gregg L. Semenza
Physiology meets biophysics: Visualizing the interaction of hypoxia-inducible factor 1α with p300 and CBP
PNAS 2002 99:11570-11572; published online before print August 19, 2002, doi:10.1073/pnas.192442299

Physical Sciences

Chemistry

Select this article
Physical Sciences - Chemistry:
- Mattias Karlsson,
- Kristin Sott,
- Maximillian Davidson,
- Ann-Sofie Cans,
- Pontus Linderholm,
- Daniel Chiu,
- and Owe Orwar
Formation of geometrically complex lipid nanotube-vesicle networks of higher-order topologies
PNAS 2002 99:11573-11578; published online before print August 16, 2002, doi:10.1073/pnas.172183699
Select this article
Physical Sciences - Chemistry:
- Dong H. Zhang,
- Minghui Yang,
- Michael A. Collins,
- and Soo-Y. Lee
From the Cover: Probing the transition state via photoelectron and photodetachment spectroscopy of H₃O⁻
PNAS 2002 99:11579-11582; published online before print August 19, 2002, doi:10.1073/pnas.182297599
Select this article
Physical Sciences - Chemistry:
- Bing Gong,
- Huaqiang Zeng,
- Jin Zhu,
- Lihua Yua,
- Yaohua Han,
- Shizhi Cheng,
- Mako Furukawa,
- Rubén D. Parra,
- Andrey Y. Kovalevsky,
- Jeffrey L. Mills,
- Ewa Skrzypczak-Jankun,
- Suzana Martinovic,
- Richard D. Smith,
- Chong Zheng,
- Thomas Szyperski,
- and Xiao Cheng Zeng
Creating nanocavities of tunable sizes: Hollow helices
PNAS 2002 99:11583-11588; published online before print August 12, 2002, doi:10.1073/pnas.162277099

Physics

Select this article
Physical Sciences - Physics - Biological Sciences - Biochemistry:
- Roy Bar-Ziv,
- Tsvi Tlusty,
- and Albert Libchaber
Protein–DNA computation by stochastic assembly cascade
PNAS 2002 99:11589-11592; published online before print August 19, 2002, doi:10.1073/pnas.162369099

FROM THE COVER

SAGE Genie: A suite with panoramic view of gene expression

An intracellular block to primate lentivirus replication

A new name in thrombosis, ADAMTS13

Host genetic variability and West Nile virus susceptibility

Continued evolutionary surprises among dinoflagellates

RNA traffics information systemically in plants

Plant proteomics: blasting out of a MudPIT

Tyrosine phosphorylation in plant cell signaling

Physiology meets biophysics: Visualizing the interaction of hypoxia-inducible factor 1α with p300 and CBP

Formation of geometrically complex lipid nanotube-vesicle networks of higher-order topologies

From the Cover: Probing the transition state via photoelectron and photodetachment spectroscopy of H3O−

Creating nanocavities of tunable sizes: Hollow helices

Protein–DNA computation by stochastic assembly cascade

Direct evidence for a G-quadruplex in a promoter region and its targeting with a small molecule to repress c-MYC transcription

Protein–DNA computation by stochastic assembly cascade

1-Cys peroxiredoxin overexpression protects cells against phospholipid peroxidation-mediated membrane damage

Reactions of cysteines substituted in the amphipathic N-terminal tail of a bacterial potassium channel with hydrophilic and hydrophobic maleimides

Dynamic and clustering model of bacterial chemotaxis receptors: Structural basis for signaling and high sensitivity

Isolation of high-affinity GTP aptamers from partially structured RNA libraries

SALSA, a variant of yeast SAGA, contains truncated Spt7, which correlates with activated transcription

Phytochrome from Agrobacterium tumefaciens has unusual spectral properties and reveals an N-terminal chromophore attachment site

Inaugural Article: A linear lattice model for polyglutamine in CAG-expansion diseases

The tobacco salicylic acid-binding protein 3 (SABP3) is the chloroplast carbonic anhydrase, which exhibits antioxidant activity and plays a role in the hypersensitive defense response

A far-red fluorescent protein with fast maturation and reduced oligomerization tendency from Entacmaea quadricolor (Anthozoa, Actinaria)

The C2A domain of JFC1 binds to 3′-phosphorylated phosphoinositides and directs plasma membrane association in living cells

Evidence against stabilization of the transition state oxyanion by a pKa-perturbed RNA base in the peptidyl transferase center

Structural genomics of the Thermotoga maritima proteome implemented in a high-throughput structure determination pipeline

Structural insights into peptide bond formation

From the Cover: Specificity of RNA–RNA helix recognition

Using mechanical force to probe the mechanism of pausing and arrest during continuous elongation by Escherichia coli RNA polymerase

Arrangement of RecA protein in its active filament determined by polarized-light spectroscopy

Sterols block binding of COPII proteins to SCAP, thereby controlling SCAP sorting in ER

The histone deacetylase inhibitor SAHA arrests cancer cell growth, up-regulates thioredoxin-binding protein-2, and down-regulates thioredoxin

Male germ-line stem cell potential is predicted by morphology of cells in neonatal rat testes

TCL1 participates in early embryonic development and is overexpressed in human seminomas

Circadian genes in a blind subterranean mammal II: Conservation and uniqueness of the three Period homologs in the blind subterranean mole rat, Spalax ehrenbergi superspecies

A single origin of the peridinin- and fucoxanthin-containing plastids in dinoflagellates through tertiary endosymbiosis

Ancient mitochondrial haplotypes and evidence for intragenic recombination in a gynodioecious plant

Inactivation of CMP-N-acetylneuraminic acid hydroxylase occurred prior to brain expansion during human evolution

Loss of microsatellite diversity and low effective population size in an overexploited population of New Zealand snapper (Pagrus auratus)

Evidence for an ancient selective sweep in the MHC class I gene repertoire of chimpanzees

The novel Rho-GTPase activating gene MEGAP/ srGAP3 has a putative role in severe mental retardation

From the Cover: Probing the transition state via photoelectron and photodetachment spectroscopy of H₃O⁻