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Proceedings of the National Academy of Sciences of the United States of America
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Table of Contents
November 20, 2001; 98 (24)
Index By Author
Cover Photo
FROM THE COVER
Compartmentalized signaling flushes noxious materials
Recognizing the D-loop of tRNAs
Molecular scaffold for terpene cyclases
A fossil record of drug-resistant HIV-1
Estrogen action and male fertility
Commentaries
Commentary
:
Tamara L. Hendrickson
Recognizing the D-loop of transfer RNAs
PNAS
2001
98
:
13473
-
13475
;
doi:10.1073/pnas.251549298
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13537
in issue 24 of volume 98
Commentary
:
Howard C. Towle
Glucose and cAMP: Adversaries in the regulation of hepatic gene expression
PNAS
2001
98
:
13476
-
13478
;
doi:10.1073/pnas.251530798
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13710
in issue 24 of volume 98
Commentary
:
Bryan Greenhagen
and
Joseph Chappell
Molecular scaffolds for chemical wizardry: Learning nature's rules for terpene cyclases
PNAS
2001
98
:
13479
-
13481
;
doi:10.1073/pnas.261562898
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13543
in issue 24 of volume 98
Commentary
:
James H. Schwartz
The many dimensions of cAMP signaling
PNAS
2001
98
:
13482
-
13484
;
doi:10.1073/pnas.251533998
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13049
in issue 23 of volume 98
Commentary
:
Daniel R. Kuritzkes
A fossil record of zidovudine resistance in transmitted isolates of HIV-1
PNAS
2001
98
:
13485
-
13487
;
doi:10.1073/pnas.251559398
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13907
in issue 24 of volume 98
Commentary
:
Gaetano T. Montelione
Structural genomics: An approach to the protein folding problem
PNAS
2001
98
:
13488
-
13489
;
doi:10.1073/pnas.261549098
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12896
in issue 23 of volume 98
Physical Sciences
Geology
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Physical Sciences - Geology
:
Peter R. Buseck
,
Rafal E. Dunin-Borkowski
,
Bertrand Devouard
,
Richard B. Frankel
,
Martha R. McCartney
,
Paul A. Midgley
,
Mihály Pósfai
,
and
Matthew Weyland
Magnetite morphology and life on Mars
PNAS
2001
98
:
13490
-
13495
;
doi:10.1073/pnas.241387898
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Physics
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Physical Sciences - Physics
:
D. Moses
,
J. Wang
,
A. J. Heeger
,
N. Kirova
,
and
S. Brazovski
Inaugural Article: Singlet exciton binding energy in poly(phenylene vinylene)
PNAS
2001
98
:
13496
-
13500
;
published ahead of print
November 13, 2001
,
doi:10.1073/pnas.241497098
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Social Sciences
Anthropology
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Social Sciences - Anthropology
:
João Zilhão
Radiocarbon evidence for maritime pioneer colonization at the origins of farming in west Mediterranean Europe
PNAS
2001
98
:
14180
-
14185
;
published ahead of print
November 13, 2001
,
doi:10.1073/pnas.241522898
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Biological Sciences
Applied Biological Sciences
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Biological Sciences - Applied Biological Sciences
:
Hirokazu Kusakabe
,
Monika A. Szczygiel
,
David G. Whittingham
,
and
Ryuzo Yanagimachi
Inaugural Article: Maintenance of genetic integrity in frozen and freeze-dried mouse spermatozoa
PNAS
2001
98
:
13501
-
13506
;
published ahead of print
November 13, 2001
,
doi:10.1073/pnas.241517598
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Biological Sciences - Applied Biological Sciences
:
Raymond K. Blanchard
,
J. Bernadette Moore
,
Calvert L. Green
,
and
Robert J. Cousins
Inaugural Article: Modulation of intestinal gene expression by dietary zinc status: Effectiveness of cDNA arrays for expression profiling of a single nutrient deficiency
PNAS
2001
98
:
13507
-
13513
;
doi:10.1073/pnas.251532498
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Biochemistry
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Biological Sciences - Biochemistry
:
Dorothy S. Worrall
,
Jonathan E. McDunn
,
Benjamin List
,
Donna Reichart
,
Andrea Hevener
,
Thomas Gustafson
,
Carlos F. Barbas, III
,
Richard A. Lerner
,
and
Jerrold M. Olefsky
Synthesis of an organoinsulin molecule that can be activated by antibody catalysis
PNAS
2001
98
:
13514
-
13518
;
published ahead of print
November 13, 2001
,
doi:10.1073/pnas.241516698
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Biological Sciences - Biochemistry
:
Norman Kairies
,
Hans-Georg Beisel
,
Pablo Fuentes-Prior
,
Ryoko Tsuda
,
Tatsushi Muta
,
Sadaaki Iwanaga
,
Wolfram Bode
,
Robert Huber
,
and
Shun-ichiro Kawabata
The 2.0-Å crystal structure of tachylectin 5A provides evidence for the common origin of the innate immunity and the blood coagulation systems
PNAS
2001
98
:
13519
-
13524
;
published ahead of print
November 13, 2001
,
doi:10.1073/pnas.201523798
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Biological Sciences - Biochemistry
:
Samuel M. Young, Jr.
and
Richard Jude Samulski
Adeno-associated virus (AAV) site-specific recombination does not require a Rep-dependent origin of replication within the AAV terminal repeat
PNAS
2001
98
:
13525
-
13530
;
published ahead of print
November 13, 2001
,
doi:10.1073/pnas.241508998
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Biological Sciences - Biochemistry
:
Peter Nollau
and
Bruce J. Mayer
Profiling the global tyrosine phosphorylation state by Src homology 2 domain binding
PNAS
2001
98
:
13531
-
13536
;
published ahead of print
November 6, 2001
,
doi:10.1073/pnas.241215998
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Biological Sciences - Biochemistry
:
Atsushi Shimada
,
Osamu Nureki
,
Mie Goto
,
Seizo Takahashi
,
and
Shigeyuki Yokoyama
From the Cover: Structural and mutational studies of the recognition of the arginine tRNA-specific major identity element, A20, by arginyl-tRNA synthetase
PNAS
2001
98
:
13537
-
13542
;
published ahead of print
November 6, 2001
,
doi:10.1073/pnas.231267998
Abstract
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13473
in issue 24 of volume 98
Select this article
Biological Sciences - Biochemistry
:
Michael J. Rynkiewicz
,
David E. Cane
,
and
David W. Christianson
From the Cover: Structure of trichodiene synthase from Fusarium sporotrichioides provides mechanistic inferences on the terpene cyclization cascade
PNAS
2001
98
:
13543
-
13548
;
published ahead of print
November 6, 2001
,
doi:10.1073/pnas.231313098
Abstract
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13479
in issue 24 of volume 98
Select this article
Biological Sciences - Biochemistry
:
Anna E. Dikalova
,
Maria B. Kadiiska
,
and
Ronald P. Mason
An in vivo ESR spin-trapping study: Free radical generation in rats from formate intoxication— role of the Fenton reaction
PNAS
2001
98
:
13549
-
13553
;
doi:10.1073/pnas.251091098
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Biological Sciences - Biochemistry
:
Shinobu Kitazume
,
Yuriko Tachida
,
Ritsuko Oka
,
Keiro Shirotani
,
Takaomi C. Saido
,
and
Yasuhiro Hashimoto
Alzheimer's β-secretase, β-site amyloid precursor protein-cleaving enzyme, is responsible for cleavage secretion of a Golgi-resident sialyltransferase
PNAS
2001
98
:
13554
-
13559
;
published ahead of print
November 6, 2001
,
doi:10.1073/pnas.241509198
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Biological Sciences - Biochemistry
:
Hirofumi Komori
,
Ryoji Masui
,
Seiki Kuramitsu
,
Shigeyuki Yokoyama
,
Takehiko Shibata
,
Yorinao Inoue
,
and
Kunio Miki
Crystal structure of thermostable DNA photolyase: Pyrimidine-dimer recognition mechanism
PNAS
2001
98
:
13560
-
13565
;
published ahead of print
November 13, 2001
,
doi:10.1073/pnas.241371398
Abstract
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Biological Sciences - Biochemistry
:
Praveena Gupta
,
Abigail A. Soyombo
,
Armita Atashband
,
Krystyna E. Wisniewski
,
John M. Shelton
,
James A. Richardson
,
Robert E. Hammer
,
and
Sandra L. Hofmann
Disruption of PPT1 or PPT2 causes neuronal ceroid lipofuscinosis in knockout mice
PNAS
2001
98
:
13566
-
13571
;
doi:10.1073/pnas.251485198
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Biological Sciences - Biochemistry
:
Claudia Zierold
,
Jamie A. Mings
,
and
Hector F. DeLuca
Parathyroid hormone regulates 25-hydroxyvitamin D 3 -24-hydroxylase mRNA by altering its stability
PNAS
2001
98
:
13572
-
13576
;
published ahead of print
November 6, 2001
,
doi:10.1073/pnas.241516798
Abstract
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Biological Sciences - Biochemistry
:
Matthew S. Bennett
,
Zhi Guan
,
Martin Laurberg
,
and
Xiao-Dong Su
Bacillus subtilis arsenate reductase is structurally and functionally similar to low molecular weight protein tyrosine phosphatases
PNAS
2001
98
:
13577
-
13582
;
published ahead of print
November 6, 2001
,
doi:10.1073/pnas.241397198
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Biological Sciences - Biochemistry
:
Egon Persson
,
Marianne Kjalke
,
and
Ole H. Olsen
Rational design of coagulation factor VIIa variants with substantially increased intrinsic activity
PNAS
2001
98
:
13583
-
13588
;
published ahead of print
November 6, 2001
,
doi:10.1073/pnas.241339498
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Biological Sciences - Biochemistry
:
Joon-Kyu Lee
,
Kyeong-Yeop Moon
,
Yun Jiang
,
and
Jerard Hurwitz
The Schizosaccharomyces pombe origin recognition complex interacts with multiple AT-rich regions of the replication origin DNA by means of the AT-hook domains of the spOrc4 protein
PNAS
2001
98
:
13589
-
13594
;
doi:10.1073/pnas.251530398
Abstract
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Biological Sciences - Biochemistry
:
Stefan Jennewein
,
Christopher D. Rithner
,
Robert M. Williams
,
and
Rodney B. Croteau
Taxol biosynthesis: Taxane 13α-hydroxylase is a cytochrome P450-dependent monooxygenase
PNAS
2001
98
:
13595
-
13600
;
published ahead of print
November 13, 2001
,
doi:10.1073/pnas.251539398
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Biological Sciences - Biochemistry
:
Markus Hartl
,
Fritz Reiter
,
Andreas G. Bader
,
Marc Castellazzi
,
and
Klaus Bister
JAC , a direct target of oncogenic transcription factor Jun, is involved in cell transformation and tumorigenesis
PNAS
2001
98
:
13601
-
13606
;
published ahead of print
November 6, 2001
,
doi:10.1073/pnas.241451198
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Biological Sciences - Biochemistry
:
Jian Yang
,
Joseph L. Goldstein
,
Robert E. Hammer
,
Young-Ah Moon
,
Michael S. Brown
,
and
Jay D. Horton
Decreased lipid synthesis in livers of mice with disrupted Site-1 protease gene
PNAS
2001
98
:
13607
-
13612
;
doi:10.1073/pnas.201524598
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Biological Sciences - Biochemistry
:
Yu Shen
,
Ralf Luche
,
Bo Wei
,
Marcia L. Gordon
,
Curtis D. Diltz
,
and
Nicholas K. Tonks
Activation of the Jnk signaling pathway by a dual-specificity phosphatase, JSP-1
PNAS
2001
98
:
13613
-
13618
;
doi:10.1073/pnas.231499098
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Biological Sciences - Biochemistry
:
Mihaela Unciuleac
and
Matthias Boll
Mechanism of ATP-driven electron transfer catalyzed by the benzene ring-reducing enzyme benzoyl- CoA reductase
PNAS
2001
98
:
13619
-
13624
;
published ahead of print
November 6, 2001
,
doi:10.1073/pnas.241375598
Abstract
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Biological Sciences - Biochemistry
:
Guo Guang Du
,
Xinghua Guo
,
Vijay K. Khanna
,
and
David H. MacLennan
Ryanodine sensitizes the cardiac Ca 2+ release channel (ryanodine receptor isoform 2) to Ca 2+ activation and dissociates as the channel is closed by Ca 2+ depletion
PNAS
2001
98
:
13625
-
13630
;
published ahead of print
November 6, 2001
,
doi:10.1073/pnas.241516898
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Biological Sciences - Biochemistry
:
Renate Voit
and
Ingrid Grummt
Phosphorylation of UBF at serine 388 is required for interaction with RNA polymerase I and activation of rDNA transcription
PNAS
2001
98
:
13631
-
13636
;
published ahead of print
November 6, 2001
,
doi:10.1073/pnas.231071698
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Biological Sciences - Biochemistry
:
Stephen M. Secor
,
Drew Fehsenfeld
,
Jared Diamond
,
and
Thomas E. Adrian
Responses of python gastrointestinal regulatory peptides to feeding
PNAS
2001
98
:
13637
-
13642
;
published ahead of print
November 13, 2001
,
doi:10.1073/pnas.241524698
Abstract
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Biophysics
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Biological Sciences - Biophysics
:
Caroline M. Ajo-Franklin
,
Lance Kam
,
and
Steven G. Boxer
High refractive index substrates for fluorescence microscopy of biological interfaces with high z contrast
PNAS
2001
98
:
13643
-
13648
;
doi:10.1073/pnas.241208698
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Biological Sciences - Biophysics
:
Yoko Hirono-Hara
,
Hiroyuki Noji
,
Masaya Nishiura
,
Eiro Muneyuki
,
Kiyotaka Y. Hara
,
Ryohei Yasuda
,
Kazuhiko Kinosita, Jr.
,
and
Masasuke Yoshida
Pause and rotation of F 1 -ATPase during catalysis
PNAS
2001
98
:
13649
-
13654
;
published ahead of print
November 13, 2001
,
doi:10.1073/pnas.241365698
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Biological Sciences - Biophysics
:
Ronald S. Rock
,
Sarah E. Rice
,
Amber L. Wells
,
Thomas J. Purcell
,
James A. Spudich
,
and
H. Lee Sweeney
Myosin VI is a processive motor with a large step size
PNAS
2001
98
:
13655
-
13659
;
published ahead of print
November 13, 2001
,
doi:10.1073/pnas.191512398
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Biological Sciences - Biophysics
:
Donna L. Wilson
,
Raquel Martin
,
Seunghun Hong
,
Mark Cronin-Golomb
,
Chad A. Mirkin
,
and
David L. Kaplan
Surface organization and nanopatterning of collagen by dip-pen nanolithography
PNAS
2001
98
:
13660
-
13664
;
published ahead of print
November 13, 2001
,
doi:10.1073/pnas.241323198
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Biological Sciences - Biophysics
:
Junpeng Deng
,
Yong Xiong
,
and
Muttaiya Sundaralingam
X-ray analysis of an RNA tetraplex (UGGGGU) 4 with divalent Sr 2+ ions at subatomic resolution (0.61 Å)
PNAS
2001
98
:
13665
-
13670
;
published ahead of print
November 13, 2001
,
doi:10.1073/pnas.241374798
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Biological Sciences - Biophysics
:
James Kindt
,
Shelly Tzlil
,
Avinoam Ben-Shaul
,
and
William M. Gelbart
DNA packaging and ejection forces in bacteriophage
PNAS
2001
98
:
13671
-
13674
;
published ahead of print
November 13, 2001
,
doi:10.1073/pnas.241486298
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Cell Biology
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Biological Sciences - Cell Biology
:
Michele H. Jones
,
Xiangwei He
,
Thomas H. Giddings
,
and
Mark Winey
Yeast Dam1p has a role at the kinetochore in assembly of the mitotic spindle
PNAS
2001
98
:
13675
-
13680
;
published ahead of print
November 6, 2001
,
doi:10.1073/pnas.241417098
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Biological Sciences - Cell Biology
:
Brydon L. Bennett
,
Dennis T. Sasaki
,
Brion W. Murray
,
Eoin C. O'Leary
,
Steve T. Sakata
,
Weiming Xu
,
Jim C. Leisten
,
Aparna Motiwala
,
Steve Pierce
,
Yoshitaka Satoh
,
Shripad S. Bhagwat
,
Anthony M. Manning
,
and
David W. Anderson
SP600125, an anthrapyrazolone inhibitor of Jun N-terminal kinase
PNAS
2001
98
:
13681
-
13686
;
doi:10.1073/pnas.251194298
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Biological Sciences - Cell Biology
:
Jason C. Mills
,
Andrew J. Syder
,
Chieu V. Hong
,
Janaki L. Guruge
,
Farhang Raaii
,
and
Jeffrey I. Gordon
A molecular profile of the mouse gastric parietal cell with and without exposure to Helicobacter pylori
PNAS
2001
98
:
13687
-
13692
;
doi:10.1073/pnas.231332398
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Biological Sciences - Cell Biology
:
Aixiang Jiang
,
Kaisa Lehti
,
Xing Wang
,
Stephen J. Weiss
,
Jorma Keski-Oja
,
and
Duanqing Pei
Regulation of membrane-type matrix metalloproteinase 1 activity by dynamin-mediated endocytosis
PNAS
2001
98
:
13693
-
13698
;
published ahead of print
November 6, 2001
,
doi:10.1073/pnas.241293698
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Biological Sciences - Cell Biology
:
Christopher J. McGann
,
Shannon J. Odelberg
,
and
Mark T. Keating
Mammalian myotube dedifferentiation induced by newt regeneration extract
PNAS
2001
98
:
13699
-
13704
;
doi:10.1073/pnas.221297398
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Biological Sciences - Cell Biology
:
Ken Matsuoka
,
Randy Schekman
,
Lelio Orci
,
and
John E. Heuser
Surface structure of the COPII-coated vesicle
PNAS
2001
98
:
13705
-
13709
;
doi:10.1073/pnas.241522198
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Biological Sciences - Cell Biology
:
Takumi Kawaguchi
,
Makoto Takenoshita
,
Tsutomu Kabashima
,
and
Kosaku Uyeda
Glucose and cAMP regulate the L-type pyruvate kinase gene by phosphorylation/dephosphorylation of the carbohydrate response element binding protein
PNAS
2001
98
:
13710
-