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Proceedings of the National Academy of Sciences of the United States of America
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Table of Contents
November 9, 1999; 96 (23)
Index By Author
Cover Photo
FROM THE COVER
Capturing chemical intermediate states
Dioxygen bond cleavage in proton pumps
Freezing and melting at the liquid-vapor interface
Setting our circadian rhythms
Neuropeptides and limbic seizures
Commentary
Commentary
:
Gerald T. Babcock
How oxygen is activated and reduced in respiration
PNAS
1999
96
:
12971
-
12973
Extract
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See companion article on page
13114
in issue 23 of volume 96
Physical Sciences
Applied Mathematics
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Physical Sciences - Applied Mathematics
:
Alexei A. Podtelezhnikov
,
Nicholas R. Cozzarelli
,
and
Alexander V. Vologodskii
Equilibrium distributions of topological states in circular DNA: Interplay of supercoiling and knotting
PNAS
1999
96
:
12974
-
12979
Abstract
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Chemistry
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Physical Sciences - Chemistry
:
D. E. Folmer
,
E. S. Wisniewski
,
S. M. Hurley
,
and
A. W. Castleman, Jr.
Inaugural Article: Femtosecond cluster studies of the solvated 7-azaindole excited state double-proton transfer
PNAS
1999
96
:
12980
-
12986
Abstract
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Physical Sciences - Chemistry - Biological Sciences - Biophysics
:
Ivan J. Dmochowski
,
Brian R. Crane
,
Jonathan J. Wilker
,
Jay R. Winkler
,
and
Harry B. Gray
Optical detection of cytochrome P450 by sensitizer-linked substrates
PNAS
1999
96
:
12987
-
12990
Abstract
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Physical Sciences - Chemistry - Biological Sciences - Biophysics
:
Ariel Fernández
,
Konstantin Kostov
,
and
R. Stephen Berry
From residue matching patterns to protein folding topographies: General model and bovine pancreatic trypsin inhibitor
PNAS
1999
96
:
12991
-
12996
Abstract
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Physical Sciences - Chemistry - Biological Sciences - Biochemistry
:
Seongwoo Hwang
,
Natarajan Tamilarasu
,
Kevin Ryan
,
Ikramul Huq
,
Sara Richter
,
W. Clark Still
,
and
Tariq M. Rana
Inhibition of gene expression in human cells through small molecule-RNA interactions
PNAS
1999
96
:
12997
-
13002
Abstract
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Physical Sciences - Chemistry
:
Sergei Tretiak
,
Wei Min Zhang
,
Vladimir Chernyak
,
and
Shaul Mukamel
Excitonic couplings and electronic coherence in bridged naphthalene dimers
PNAS
1999
96
:
13003
-
13008
Abstract
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Physical Sciences - Chemistry
:
Bin Yang
,
David Gidalevitz
,
Dongxu Li
,
Zhengqing Huang
,
and
Stuart A. Rice
Two-dimensional freezing in the liquid–vapor interface of a dilute Pb:Ga alloy
PNAS
1999
96
:
13009
-
13011
Abstract
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Physical Sciences - Chemistry - Biological Sciences - Biophysics
:
Joel S. Bader
,
Richard W. Hammond
,
Steven A. Henck
,
Michael W. Deem
,
Gregory A. McDermott
,
James M. Bustillo
,
John W. Simpson
,
Gregory T. Mulhern
,
and
Jonathan M. Rothberg
DNA transport by a micromachined Brownian ratchet device
PNAS
1999
96
:
13165
-
13169
Abstract
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Geophysics
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Physical Sciences - Geophysics
:
Susan Solomon
and
Charles R. Stearns
On the role of the weather in the deaths of R. F. Scott and his companions
PNAS
1999
96
:
13012
-
13016
Abstract
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Physical Sciences - Geophysics - Biological Sciences - Ecology
:
Jean-Pierre Gattuso
,
Michel Frankignoulle
,
and
Stephen V. Smith
Measurement of community metabolism and significance in the coral reef CO 2 source-sink debate
PNAS
1999
96
:
13017
-
13022
Abstract
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Statistics
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Physical Sciences - Statistics - Biological Sciences - Medical Sciences
:
Angela M. Lopez
,
Mark D. Pegram
,
Dennis J. Slamon
,
and
Elliot M. Landaw
A model-based approach for assessing in vivo combination therapy interactions
PNAS
1999
96
:
13023
-
13028
Abstract
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Social Sciences
Anthropology
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Biological Sciences - Evolution - Social Sciences - Anthropology
:
Marco Salemi
,
Martha Lewis
,
John Fergal Egan
,
William W. Hall
,
Jan Desmyter
,
and
Anne-Mieke Vandamme
Different population dynamics of human T cell lymphotropic virus type II in intravenous drug users compared with endemically infected tribes
PNAS
1999
96
:
13253
-
13258
Abstract
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Biological Sciences
Anthropology
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Biological Sciences - Anthropology - Biological Sciences - Evolution
:
C. Owen Lovejoy
,
Martin J. Cohn
,
and
Tim D. White
Morphological analysis of the mammalian postcranium: A developmental perspective
PNAS
1999
96
:
13247
-
13252
Abstract
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Applied Biological Sciences
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Biological Sciences - Applied Biological Sciences
:
Richard J. St. John
,
John F. Carpenter
,
and
Theodore W. Randolph
High pressure fosters protein refolding from aggregates at high concentrations
PNAS
1999
96
:
13029
-
13033
Abstract
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Biochemistry
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Physical Sciences - Chemistry - Biological Sciences - Biochemistry
:
Seongwoo Hwang
,
Natarajan Tamilarasu
,
Kevin Ryan
,
Ikramul Huq
,
Sara Richter
,
W. Clark Still
,
and
Tariq M. Rana
Inhibition of gene expression in human cells through small molecule-RNA interactions
PNAS
1999
96
:
12997
-
13002
Abstract
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Biological Sciences - Biochemistry
:
Stéphane Bressanelli
,
Licia Tomei
,
Alain Roussel
,
Ilario Incitti
,
Rosa Letizia Vitale
,
Magali Mathieu
,
Raffaele De Francesco
,
and
Félix A. Rey
Crystal structure of the RNA-dependent RNA polymerase of hepatitis C virus
PNAS
1999
96
:
13034
-
13039
Abstract
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Biological Sciences - Biochemistry
:
Yehuda Goldgur
,
Robert Craigie
,
Gerson H. Cohen
,
Tamio Fujiwara
,
Tomokazu Yoshinaga
,
Toshio Fujishita
,
Hirohiko Sugimoto
,
Takeshi Endo
,
Hitoshi Murai
,
and
David R. Davies
Structure of the HIV-1 integrase catalytic domain complexed with an inhibitor: A platform for antiviral drug design
PNAS
1999
96
:
13040
-
13043
Abstract
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Biological Sciences - Biochemistry
:
Pauline M. Rudd
,
Tama Endo
,
Cristina Colominas
,
Darlene Groth
,
Susan F. Wheeler
,
David J. Harvey
,
Mark R. Wormald
,
Hana Serban
,
Stanley B. Prusiner
,
Akira Kobata
,
and
Raymond A. Dwek
Glycosylation differences between the normal and pathogenic prion protein isoforms
PNAS
1999
96
:
13044
-
13049
Abstract
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Biological Sciences - Biochemistry
:
William T. Doerrler
and
Mark A. Lehrman
Regulation of the dolichol pathway in human fibroblasts by the endoplasmic reticulum unfolded protein response
PNAS
1999
96
:
13050
-
13055
Abstract
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Biological Sciences - Biochemistry
:
Zhenhao Qi
,
Iqbal Hamza
,
and
Mark R. O’Brian
Heme is an effector molecule for iron-dependent degradation of the bacterial iron response regulator (Irr) protein
PNAS
1999
96
:
13056
-
13061
Abstract
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Biological Sciences - Biochemistry
:
Charles C. Burke
,
Mark R. Wildung
,
and
Rodney Croteau
Geranyl diphosphate synthase: Cloning, expression, and characterization of this prenyltransferase as a heterodimer
PNAS
1999
96
:
13062
-
13067
Abstract
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Biological Sciences - Biochemistry
:
Jianguo Wu
,
Noriko Ohta
,
Ji-Liang Zhao
,
and
Austin Newton
A novel bacterial tyrosine kinase essential for cell division and differentiation
PNAS
1999
96
:
13068
-
13073
Abstract
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Biological Sciences - Biochemistry
:
Sangita Sinha
,
Pekka Rappu
,
S. C. Lange
,
Pekka Mäntsälä
,
Howard Zalkin
,
and
Janet L. Smith
Crystal structure of Bacillus subtilis YabJ, a purine regulatory protein and member of the highly conserved YjgF family
PNAS
1999
96
:
13074
-
13079
Abstract
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Biological Sciences - Biochemistry
:
Long Thai
,
Jeffrey S. Rush
,
Jude E. Maul
,
Timothy Devarenne
,
Dana L. Rodgers
,
Joseph Chappell
,
and
Charles J. Waechter
Farnesol is utilized for isoprenoid biosynthesis in plant cells via farnesyl pyrophosphate formed by successive monophosphorylation reactions
PNAS
1999
96
:
13080
-
13085
Abstract
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Biological Sciences - Biochemistry
:
Michael P. Schwartz
and
Andreas Matouschek
The dimensions of the protein import channels in the outer and inner mitochondrial membranes
PNAS
1999
96
:
13086
-
13090
Abstract
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Biological Sciences - Biochemistry
:
Claudio Vita
,
Eugenia Drakopoulou
,
Jean Vizzavona
,
Sandrine Rochette
,
Loïc Martin
,
André Ménez
,
Christian Roumestand
,
Yin-Shan Yang
,
Loyda Ylisastigui
,
Abdelaziz Benjouad
,
and
Jean Claude Gluckman
Rational engineering of a miniprotein that reproduces the core of the CD4 site interacting with HIV-1 envelope glycoprotein
PNAS
1999
96
:
13091
-
13096
Abstract
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Biological Sciences - Biochemistry
:
Anne M. Mulichak
,
Michael J. Theisen
,
Bernd Essigmann
,
Christoph Benning
,
and
R. Michael Garavito
Crystal structure of SQD1, an enzyme involved in the biosynthesis of the plant sulfolipid headgroup donor UDP-sulfoquinovose
PNAS
1999
96
:
13097
-
13102
Abstract
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Biological Sciences - Biochemistry
:
J. Sook Chung
,
Heinrich Dircksen
,
and
Simon G. Webster
A remarkable, precisely timed release of hyperglycemic hormone from endocrine cells in the gut is associated with ecdysis in the crab Carcinus maenas
PNAS
1999
96
:
13103
-
13107
Abstract
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Biological Sciences - Biochemistry
:
Junming Yie
,
Kate Senger
,
and
Dimitris Thanos
Mechanism by which the IFN-β enhanceosome activates transcription
PNAS
1999
96
:
13108
-
13113
Abstract
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Biological Sciences - Biochemistry
:
Marian Fabian
,
William W. Wong
,
Robert B. Gennis
,
and
Graham Palmer
Mass spectrometric determination of dioxygen bond splitting in the “peroxy” intermediate of cytochrome c oxidase
PNAS
1999
96
:
13114
-
13117
Abstract
Full Text
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See commentary article on page
12971
in issue 23 of volume 96
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Biological Sciences - Biochemistry
:
Gregg Johannes
,
Mark S. Carter
,
Michael B. Eisen
,
Patrick O. Brown
,
and
Peter Sarnow
Identification of eukaryotic mRNAs that are translated at reduced cap binding complex eIF4F concentrations using a cDNA microarray
PNAS
1999
96
:
13118
-
13123
Abstract
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Biological Sciences - Biochemistry
:
Hong Yin
,
Irina Artsimovitch
,
Robert Landick
,
and
Jeff Gelles
Nonequilibrium mechanism of transcription termination from observations of single RNA polymerase molecules
PNAS
1999
96
:
13124
-
13129
Abstract
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Biological Sciences - Biochemistry
:
Xianxin Hua
,
Zachary A. Miller
,
Geng Wu
,
Yigong Shi
,
and
Harvey F. Lodish
Specificity in transforming growth factor β-induced transcription of the plasminogen activator inhibitor-1 gene: Interactions of promoter DNA, transcription factor μE3, and Smad proteins
PNAS
1999
96
:
13130
-
13135
Abstract
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Biological Sciences - Biochemistry
:
Barbaros Balabanli
,
Yoshinori Kamisaki
,
Emil Martin
,
and
Ferid Murad
Requirements for heme and thiols for the nonenzymatic modification of nitrotyrosine
PNAS
1999
96
:
13136
-
13141
Abstract
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Biological Sciences - Biochemistry
:
Dalai Yan
and
Sydney Kustu
“Switch I” mutant forms of the bacterial enhancer-binding protein NtrC that perturb the response to DNA
PNAS
1999
96
:
13142
-
13146
Abstract
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Biophysics
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Physical Sciences - Chemistry - Biological Sciences - Biophysics
:
Ivan J. Dmochowski
,
Brian R. Crane
,
Jonathan J. Wilker
,
Jay R. Winkler
,
and
Harry B. Gray
Optical detection of cytochrome P450 by sensitizer-linked substrates
PNAS
1999
96
:
12987
-
12990
Abstract
Full Text
Full Text (PDF)
Figures Only
Select this article
Physical Sciences - Chemistry - Biological Sciences - Biophysics
:
Ariel Fernández
,
Konstantin Kostov
,
and
R. Stephen Berry
From residue matching patterns to protein folding topographies: General model and bovine pancreatic trypsin inhibitor
PNAS
1999
96
:
12991
-
12996
Abstract
Full Text
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Biological Sciences - Biophysics
:
William O. Hancock
and
Jonathon Howard
Kinesin’s processivity results from mechanical and chemical coordination between the ATP hydrolysis cycles of the two motor domains
PNAS
1999
96
:
13147
-
13152
Abstract
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Biological Sciences - Biophysics
:
Heinz Fabian
,
Henry H. Mantsch
,
and
Christian P. Schultz
Two-dimensional IR correlation spectroscopy: Sequential events in the unfolding process of the λ Cro-V55C repressor protein
PNAS
1999
96
:
13153
-
13158
Abstract
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Biological Sciences - Biophysics
:
Oksana A. Gopta
,
Dmitry A. Cherepanov
,
Wolfgang Junge
,
and
Armen Y. Mulkidjanian
Proton transfer from the bulk to the bound ubiquinone Q B of the reaction center in chromatophores of Rhodobacter sphaeroides : Retarded conveyance by neutral water
PNAS
1999
96
:
13159
-
13164
Abstract
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Physical Sciences - Chemistry - Biological Sciences - Biophysics
:
Joel S. Bader
,
Richard W. Hammond
,
Steven A. Henck
,
Michael W. Deem
,
Gregory A. McDermott
,
James M. Bustillo
,
John W. Simpson
,
Gregory T. Mulhern
,
and
Jonathan M. Rothberg
DNA transport by a micromachined Brownian ratchet device
PNAS
1999
96
:
13165
-
13169
Abstract
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Biological Sciences - Biophysics
:
Daniel J. Müller
,
Wolfgang Baumeister
,
and
Andreas Engel
Controlled unzipping of a bacterial surface layer with atomic force microscopy
PNAS
1999
96
:
13170
-
13174
Abstract
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Biological Sciences - Biophysics
:
Cristian Ionescu-Zanetti
,
Ritu Khurana
,
Joel R. Gillespie
,
Jay S. Petrick
,
Lynne C. Trabachino
,
Lauren J. Minert
,
Sue A. Carter
,
and
Anthony L. Fink
Monitoring the assembly of Ig light-chain amyloid fibrils by atomic force microscopy
PNAS
1999
96
:
13175
-
13179
Abstract
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Cell Biology
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Biological Sciences - Cell Biology
:
Brian M. Iritani
and
Robert N. Eisenman
c-Myc enhances protein synthesis and cell size during B lymphocyte development
PNAS
1999
96
:
13180
-
13185
Abstract
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Biological Sciences - Cell Biology
:
Saghi Ghaffari
,
Hong Wu
,
Melissa Gerlach
,
Ying Han
,
Harvey F. Lodish
,
and
George Q. Daley
BCR-ABL and v-SRC tyrosine kinase oncoproteins support normal erythroid development in erythropoietin receptor-deficient progenitor cells
PNAS
1999
96
:
13186
-
13190
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Biological Sciences - Cell Biology
:
Cynthia M. Simbulan-Rosenthal
,
Bassem R. Haddad
,
Dean S. Rosenthal
,
Zoë Weaver
,
Allen Coleman
,
RuiBai Luo
,
Hannah M. Young
,
Zhao-Qi Wang
,
Thomas Ried
,
and
Mark E. Smulson
Chromosomal aberrations in PARP −/− mice: Genome stabilization in immortalized cells by reintroduction of poly(ADP-ribose) polymerase cDNA
PNAS
1999
96
:
13191
-
13196
Abstract
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Biological Sciences - Cell Biology
:
Shigeki Jinno
,
Shih-Chieh Hung
,
Hanako Yamamoto
,
Jie Lin
,
Akihisa Nagata
,
and
Hiroto Okayama
Oncogenic stimulation recruits cyclin-dependent kinase in the cell cycle start in rat fibroblast
PNAS
1999
96
: