PNAS — Table of Contents — July 10, 2007, 104 (28)

July 10, 2007; 104 (28)

FROM THE COVER

This Week in PNAS

This Week in PNAS:
In This Issue
PNAS 2007 104:11509-11510; doi:10.1073/iti2807104

Commentaries

Commentary:
- Kryn Stankunas
- and Gerald R. Crabtree
Exploiting protein destruction for constructive use
PNAS 2007 104:11511-11512; published ahead of print July 2, 2007, doi:10.1073/pnas.0704762104
- See companion article on page 11209 in issue 27 of volume 104
Commentary:
- Bruce Fischl
- and Lawrence L. Wald
Phase maps reveal cortical architecture
PNAS 2007 104:11513-11514; published ahead of print July 3, 2007, doi:10.1073/pnas.0704515104
- See companion article on page 11796 in issue 28 of volume 104

Profile

Profile:
- Melissa Marino
Profile of Barry Ganetzky
PNAS 2007 104:11515-11517; published ahead of print July 2, 2007, doi:10.1073/pnas.0701626104
- See commentary article on page 14987 in issue 41 of volume 103

Physical Sciences

Chemistry

Select this article
Physical Sciences - Chemistry - Biological Sciences - Applied Biological Sciences:
- Kanoelani T. Pilobello,
- Deepika E. Slawek,
- and Lara K. Mahal
A ratiometric lectin microarray approach to analysis of the dynamic mammalian glycome
PNAS 2007 104:11534-11539; published ahead of print July 2, 2007, doi:10.1073/pnas.0704954104
Select this article
Physical Sciences - Chemistry:
- Narasimhamurthy Shanaiah,
- M. Aruni Desilva,
- G. A. Nagana Gowda,
- Michael A. Raftery,
- Bryan E. Hainline,
- and Daniel Raftery
Class selection of amino acid metabolites in body fluids using chemical derivatization and their enhanced 13 C NMR
PNAS 2007 104:11540-11544; published ahead of print July 2, 2007, doi:10.1073/pnas.0704449104
Select this article
Physical Sciences - Chemistry - Biological Sciences - Biochemistry:
- Hugo F. Azurmendi,
- Justine Vionnet,
- Lauren Wrightson,
- Loc B. Trinh,
- Joseph Shiloach,
- and Darón I. Freedberg
Extracellular structure of polysialic acid explored by on cell solution NMR
PNAS 2007 104:11557-11561; published ahead of print July 3, 2007, doi:10.1073/pnas.0704404104
Open Access Article

Geology

Select this article
Physical Sciences - Geology - Biological Sciences - Environmental Sciences:
- Julia A. Clarke,
- Daniel T. Ksepka,
- Marcelo Stucchi,
- Mario Urbina,
- Norberto Giannini,
- Sara Bertelli,
- Yanina Narváez,
- and Clint A. Boyd
Paleogene equatorial penguins challenge the proposed relationship between biogeography, diversity, and Cenozoic climate change
PNAS 2007 104:11545-11550; published ahead of print June 29, 2007, doi:10.1073/pnas.0611099104
Select this article
Physical Sciences - Geology - Biological Sciences - Ecology:
- Steven D. Emslie
- and William P. Patterson
From the Cover: Abrupt recent shift in δ 13 C and δ 15 N values in Adélie penguin eggshell in Antarctica
PNAS 2007 104:11666-11669; published ahead of print July 9, 2007, doi:10.1073/pnas.0608477104

Biological Sciences

Applied Biological Sciences

Select this article
Physical Sciences - Chemistry - Biological Sciences - Applied Biological Sciences:
- Kanoelani T. Pilobello,
- Deepika E. Slawek,
- and Lara K. Mahal
A ratiometric lectin microarray approach to analysis of the dynamic mammalian glycome
PNAS 2007 104:11534-11539; published ahead of print July 2, 2007, doi:10.1073/pnas.0704954104
Select this article
Biological Sciences - Applied Biological Sciences:
- Anthony L. Lau,
- Alice Y. Yam,
- Melissa M. D. Michelitsch,
- Xuemei Wang,
- Carol Gao,
- Robert J. Goodson,
- Robert Shimizu,
- Gulliver Timoteo,
- John Hall,
- Angelica Medina-Selby,
- Doris Coit,
- Colin McCoin,
- Bruce Phelps,
- Ping Wu,
- Celine Hu,
- David Chien,
- and David Peretz
Characterization of prion protein (PrP)-derived peptides that discriminate full-length PrP Sc from PrP C
PNAS 2007 104:11551-11556; published ahead of print June 29, 2007, doi:10.1073/pnas.0704260104
Open Access Article

Biophysics

Select this article
Biological Sciences - Biophysics:
- Leonid Meyerguz,
- Jon Kleinberg,
- and Ron Elber
From the Cover: The network of sequence flow between protein structures
PNAS 2007 104:11627-11632; published ahead of print June 27, 2007, doi:10.1073/pnas.0701393104
Select this article
Biological Sciences - Biophysics:
- Holger Kress,
- Ernst H. K. Stelzer,
- Daniela Holzer,
- Folma Buss,
- Gareth Griffiths,
- and Alexander Rohrbach
Filopodia act as phagocytic tentacles and pull with discrete steps and a load-dependent velocity
PNAS 2007 104:11633-11638; published ahead of print July 9, 2007, doi:10.1073/pnas.0702449104
Select this article
Biological Sciences - Biophysics:
- Tae Yun Kim,
- Sung-Jae Woo,
- Seong-min Hwang,
- Jin Hee Hong,
- and Kyoung J. Lee
Cardiac beat-to-beat alternations driven by unusual spiral waves
PNAS 2007 104:11639-11642; published ahead of print July 2, 2007, doi:10.1073/pnas.0704204104

Cell Biology

Select this article
Biological Sciences - Cell Biology:
- Samuel Tahk,
- Bin Liu,
- Vasili Chernishof,
- Kelly A. Wong,
- Hong Wu,
- and Ke Shuai
Control of specificity and magnitude of NF-κB and STAT1-mediated gene activation through PIASy and PIAS1 cooperation
PNAS 2007 104:11643-11648; published ahead of print July 2, 2007, doi:10.1073/pnas.0701877104
Select this article
Biological Sciences - Cell Biology:
- Craig Brooks,
- Qingqing Wei,
- Leping Feng,
- Guie Dong,
- Yanmei Tao,
- Lin Mei,
- Zi-Jian Xie,
- and Zheng Dong
Bak regulates mitochondrial morphology and pathology during apoptosis by interacting with mitofusins
PNAS 2007 104:11649-11654; published ahead of print July 2, 2007, doi:10.1073/pnas.0703976104
Select this article
Biological Sciences - Cell Biology:
- Ji-Long Liu
- and Joseph G. Gall
U bodies are cytoplasmic structures that contain uridine-rich small nuclear ribonucleoproteins and associate with P bodies
PNAS 2007 104:11655-11659; published ahead of print June 26, 2007, doi:10.1073/pnas.0704977104
Open Access Article

Developmental Biology

Select this article
Biological Sciences - Developmental Biology:
- Marc Furriols,
- Gemma Ventura,
- and Jordi Casanova
Two distinct but convergent groups of cells trigger Torso receptor tyrosine kinase activation by independently expressing torso-like
PNAS 2007 104:11660-11665; published ahead of print June 26, 2007, doi:10.1073/pnas.0700991104

Ecology

Select this article
Physical Sciences - Geology - Biological Sciences - Ecology:
- Steven D. Emslie
- and William P. Patterson
From the Cover: Abrupt recent shift in δ 13 C and δ 15 N values in Adélie penguin eggshell in Antarctica
PNAS 2007 104:11666-11669; published ahead of print July 9, 2007, doi:10.1073/pnas.0608477104

Environmental Sciences

Select this article
Physical Sciences - Geology - Biological Sciences - Environmental Sciences:
- Julia A. Clarke,
- Daniel T. Ksepka,
- Marcelo Stucchi,
- Mario Urbina,
- Norberto Giannini,
- Sara Bertelli,
- Yanina Narváez,
- and Clint A. Boyd
Paleogene equatorial penguins challenge the proposed relationship between biogeography, diversity, and Cenozoic climate change
PNAS 2007 104:11545-11550; published ahead of print June 29, 2007, doi:10.1073/pnas.0611099104

Evolution

Select this article
Biological Sciences - Evolution:
- Annie Hiniker,
- Guoping Ren,
- Begoña Heras,
- Ying Zheng,
- Stephanie Laurinec,
- Richard W. Jobson,
- Jeanne A. Stuckey,
- Jennifer L. Martin,
- and James C. A. Bardwell
Laboratory evolution of one disulfide isomerase to resemble another
PNAS 2007 104:11670-11675; published ahead of print July 3, 2007, doi:10.1073/pnas.0704692104
Open Access Article
Select this article
Biological Sciences - Evolution:
- Sulagna Banerjee,
- Prashanth Vishwanath,
- Jike Cui,
- Daniel J. Kelleher,
- Reid Gilmore,
- Phillips W. Robbins,
- and John Samuelson
The evolution of N-glycan-dependent endoplasmic reticulum quality control factors for glycoprotein folding and degradation
PNAS 2007 104:11676-11681; published ahead of print July 2, 2007, doi:10.1073/pnas.0704862104
Open Access Article

Genetics

Select this article
Biological Sciences - Genetics:
- Min Hsu,
- Michael J. McEachern,
- Alain T. Dandjinou,
- Yehuda Tzfati,
- Erica Orr,
- Elizabeth H. Blackburn,
- and Neal F. Lue
Telomerase core components protect Candida telomeres from aberrant overhang accumulation
PNAS 2007 104:11682-11687; published ahead of print July 3, 2007, doi:10.1073/pnas.0700327104
Select this article
Biological Sciences - Genetics:
- Lee J. Byrne,
- Brian S. Cox,
- Diana J. Cole,
- Martin S. Ridout,
- Byron J. T. Morgan,
- and Mick F. Tuite
Cell division is essential for elimination of the yeast [ PSI + ] prion by guanidine hydrochloride
PNAS 2007 104:11688-11693; published ahead of print July 2, 2007, doi:10.1073/pnas.0701392104
Select this article
Biological Sciences - Genetics:
- Andrey Rzhetsky,
- David Wajngurt,
- Naeun Park,
- and Tian Zheng
Probing genetic overlap among complex human phenotypes
PNAS 2007 104:11694-11699; published ahead of print July 3, 2007, doi:10.1073/pnas.0704820104
Open Access Article
Select this article
Biological Sciences - Genetics:
- John L. Hartman, IV
Buffering of deoxyribonucleotide pool homeostasis by threonine metabolism
PNAS 2007 104:11700-11705; published ahead of print July 2, 2007, doi:10.1073/pnas.0705212104

Immunology

Select this article
Biological Sciences - Immunology:
- Feici Diao,
- Shu Li,
- Yang Tian,
- Min Zhang,
- Liang-Guo Xu,
- Yan Zhang,
- Rui-Peng Wang,
- Danying Chen,
- Zhonghe Zhai,
- Bo Zhong,
- Po Tien,
- and Hong-Bing Shu
Negative regulation of MDA5- but not RIG-I-mediated innate antiviral signaling by the dihydroxyacetone kinase
PNAS 2007 104:11706-11711; published ahead of print June 28, 2007, doi:10.1073/pnas.0700544104
Select this article
Biological Sciences - Immunology:
- Charlotte L. Weller,
- Sarah J. Collington,
- Adele Hartnell,
- Dolores M. Conroy,
- Toshihiko Kaise,
- Jane E. Barker,
- Mark S. Wilson,
- Graham W. Taylor,
- Peter J. Jose,

Table of Contents

FROM THE COVER

In This Issue

Exploiting protein destruction for constructive use

Phase maps reveal cortical architecture

Profile of Barry Ganetzky

A ratiometric lectin microarray approach to analysis of the dynamic mammalian glycome

Class selection of amino acid metabolites in body fluids using chemical derivatization and their enhanced 13 C NMR

Extracellular structure of polysialic acid explored by on cell solution NMR

Paleogene equatorial penguins challenge the proposed relationship between biogeography, diversity, and Cenozoic climate change

From the Cover: Abrupt recent shift in δ 13 C and δ 15 N values in Adélie penguin eggshell in Antarctica

A ratiometric lectin microarray approach to analysis of the dynamic mammalian glycome

Characterization of prion protein (PrP)-derived peptides that discriminate full-length PrP Sc from PrP C

Inaugural Article: Differential regulation of CHOP-10/GADD153 gene expression by MAPK signaling in pancreatic β-cells

Inaugural Article: Analysis of HSD3B7 knockout mice reveals that a 3α-hydroxyl stereochemistry is required for bile acid function

Extracellular structure of polysialic acid explored by on cell solution NMR

Mycobacterium tuberculosis WhiB3 responds to O 2 and nitric oxide via its [4Fe-4S] cluster and is essential for nutrient starvation survival

Mycobacterium tuberculosis DosS is a redox sensor and DosT is a hypoxia sensor

Splicing remodels messenger ribonucleoprotein architecture via eIF4A3-dependent and -independent recruitment of exon junction complex components

Self-vaccination by methamphetamine glycation products chemically links chronic drug abuse and cardiovascular disease

Trehalose transporter 1, a facilitated and high-capacity trehalose transporter, allows exogenous trehalose uptake into cells

Crystal structures and catalytic mechanism of cytochrome P450 StaP that produces the indolocarbazole skeleton

Role of cdk2 in the sequential phosphorylation/activation of C/EBPβ during adipocyte differentiation

Crystal structures of murine thrombin in complex with the extracellular fragments of murine protease-activated receptors PAR3 and PAR4

From the Cover: Thioredoxin is required for S-nitrosation of procaspase-3 and the inhibition of apoptosis in Jurkat cells

Structural basis for conserved complement factor-like function in the antimalarial protein TEP1

Directed evolution of aryl carrier proteins in the enterobactin synthetase

From the Cover: The network of sequence flow between protein structures

Filopodia act as phagocytic tentacles and pull with discrete steps and a load-dependent velocity

Cardiac beat-to-beat alternations driven by unusual spiral waves

Control of specificity and magnitude of NF-κB and STAT1-mediated gene activation through PIASy and PIAS1 cooperation

Bak regulates mitochondrial morphology and pathology during apoptosis by interacting with mitofusins

U bodies are cytoplasmic structures that contain uridine-rich small nuclear ribonucleoproteins and associate with P bodies

Two distinct but convergent groups of cells trigger Torso receptor tyrosine kinase activation by independently expressing torso-like

From the Cover: Abrupt recent shift in δ 13 C and δ 15 N values in Adélie penguin eggshell in Antarctica

Paleogene equatorial penguins challenge the proposed relationship between biogeography, diversity, and Cenozoic climate change

Laboratory evolution of one disulfide isomerase to resemble another

The evolution of N-glycan-dependent endoplasmic reticulum quality control factors for glycoprotein folding and degradation

Telomerase core components protect Candida telomeres from aberrant overhang accumulation

Cell division is essential for elimination of the yeast [ PSI + ] prion by guanidine hydrochloride

Probing genetic overlap among complex human phenotypes

Buffering of deoxyribonucleotide pool homeostasis by threonine metabolism

Negative regulation of MDA5- but not RIG-I-mediated innate antiviral signaling by the dihydroxyacetone kinase