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Proceedings of the National Academy of Sciences of the United States of America
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Table of Contents
February 1, 2005; 102 (5)
Index By Author
Cover Photo
Masthead (PDF)
FROM THE COVER
Relating fossil record to sponge molecular phylogenies
Distant tertiary interactions and protein aggregation
Active transcription does not guide retroviral insertion
Immunoglobulin light chains induce asthma
Bacterial subversion of the host secretory pathway
Commentaries
Commentary
:
Allen P. Kaplan
A new mechanism for immunologic initiation of asthma
PNAS
2005
102
:
1267
-
1268
;
published ahead of print
January 26, 2005
,
doi:10.1073/pnas.0409828102
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1578
in issue 5 of volume 102
Commentary
:
Olle Söder
Perinatal imprinting by estrogen and adult prostate disease
PNAS
2005
102
:
1269
-
1270
;
published ahead of print
January 26, 2005
,
doi:10.1073/pnas.0409703102
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1484
in issue 5 of volume 102
Commentary
:
Craig R. Roy
Bacterial subversion of the host secretory pathway
PNAS
2005
102
:
1271
-
1272
;
published ahead of print
January 26, 2005
,
doi:10.1073/pnas.0409531101
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1673
in issue 5 of volume 102
Commentary
:
Randall A. Hughes
and
Andrew D. Ellington
Mistakes in translation don't translate into termination
PNAS
2005
102
:
1273
-
1274
;
published ahead of print
January 26, 2005
,
doi:10.1073/pnas.0409443101
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1697
in issue 5 of volume 102
Commentary
:
Alan Engelman
The ups and downs of gene expression and retroviral DNA integration
PNAS
2005
102
:
1275
-
1276
;
published ahead of print
January 26, 2005
,
doi:10.1073/pnas.0409587101
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1436
in issue 5 of volume 102
In This Issue
In This Issue
:
This Week in PNAS
PNAS
2005
102
:
1265
-
1266
;
doi:10.1073/iti0505102
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Physical Sciences
Applied Mathematics
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Physical Sciences - Applied Mathematics
:
Yu Zhang
and
Michael S. Waterman
An Eulerian path approach to local multiple alignment for DNA sequences
PNAS
2005
102
:
1285
-
1290
;
published ahead of print
January 24, 2005
,
doi:10.1073/pnas.0409240102
Abstract
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Chemistry
Physical Sciences - Chemistry
:
Tinsley Davis
Inaugural Article: Biography of Louis E. Brus
PNAS
2005
102
:
1277
-
1279
;
published ahead of print
January 26, 2005
,
doi:10.1073/pnas.0409555102
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1280
in issue 5 of volume 102
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Physical Sciences - Chemistry
:
A. J. Hallock
,
P. L. Redmond
,
and
L. E. Brus
Inaugural Article: Optical forces between metallic particles
PNAS
2005
102
:
1280
-
1284
;
published ahead of print
January 12, 2005
,
doi:10.1073/pnas.0408604101
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1277
in issue 5 of volume 102
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Physical Sciences - Chemistry
:
Isidore Last
and
Joshua Jortner
Regular multicharged transient soft matter in Coulomb explosion of heteroclusters
PNAS
2005
102
:
1291
-
1295
;
published ahead of print
January 21, 2005
,
doi:10.1073/pnas.0408636102
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Physical Sciences - Chemistry - Biological Sciences - Biochemistry
:
Douglass Wu
,
Guo-Wen Xing
,
Michael A. Poles
,
Amir Horowitz
,
Yuki Kinjo
,
Barbara Sullivan
,
Vera Bodmer-Narkevitch
,
Oliver Plettenburg
,
Mitchell Kronenberg
,
Moriya Tsuji
,
David D. Ho
,
and
Chi-Huey Wong
Bacterial glycolipids and analogs as antigens for CD1d-restricted NKT cells
PNAS
2005
102
:
1351
-
1356
;
published ahead of print
January 21, 2005
,
doi:10.1073/pnas.0408696102
Abstract
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Engineering
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Physical Sciences - Engineering
:
Robert D. White
and
Karl Grosh
Microengineered hydromechanical cochlear model
PNAS
2005
102
:
1296
-
1301
;
published ahead of print
January 21, 2005
,
doi:10.1073/pnas.0407446102
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Geology
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Physical Sciences - Geology
:
David J. Beerling
and
Robert A. Berner
Feedbacks and the coevolution of plants and atmospheric CO 2
PNAS
2005
102
:
1302
-
1305
;
published ahead of print
January 24, 2005
,
doi:10.1073/pnas.0408724102
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Geophysics
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Physical Sciences - Geophysics
:
Yangting Lin
,
Yunbin Guan
,
Laurie A. Leshin
,
Ziyuan Ouyang
,
and
Daode Wang
Short-lived chlorine-36 in a Ca- and Al-rich inclusion from the Ningqiang carbonaceous chondrite
PNAS
2005
102
:
1306
-
1311
;
published ahead of print
January 25, 2005
,
doi:10.1073/pnas.0407173101
Abstract
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Social Sciences
Psychology
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Social Sciences - Psychology
:
Robert Kurzban
and
Daniel Houser
Experiments investigating cooperative types in humans: A complement to evolutionary theory and simulations
PNAS
2005
102
:
1803
-
1807
;
published ahead of print
January 21, 2005
,
doi:10.1073/pnas.0408759102
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Biological Sciences
Anthropology
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Biological Sciences - Anthropology
:
Keith Hunley
and
Jeffrey C. Long
Gene flow across linguistic boundaries in Native North American populations
PNAS
2005
102
:
1312
-
1317
;
published ahead of print
January 24, 2005
,
doi:10.1073/pnas.0409301102
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Applied Biological Sciences
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Biological Sciences - Applied Biological Sciences
:
Rungaroon Waditee
,
Md. Nazmul H. Bhuiyan
,
Vandna Rai
,
Kenji Aoki
,
Yoshito Tanaka
,
Takashi Hibino
,
Shigetoshi Suzuki
,
Jun Takano
,
André T. Jagendorf
,
Tetsuko Takabe
,
and
Teruhiro Takabe
Genes for direct methylation of glycine provide high levels of glycinebetaine and abiotic-stress tolerance in Synechococcus and Arabidopsis
PNAS
2005
102
:
1318
-
1323
;
published ahead of print
January 21, 2005
,
doi:10.1073/pnas.0409017102
Abstract
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Biological Sciences - Applied Biological Sciences
:
Mitchell D. Knutson
,
Mohamed Oukka
,
Lindsey M. Koss
,
Fikret Aydemir
,
and
Marianne Wessling-Resnick
Iron release from macrophages after erythrophagocytosis is up-regulated by ferroportin 1 overexpression and down-regulated by hepcidin
PNAS
2005
102
:
1324
-
1328
;
published ahead of print
January 21, 2005
,
doi:10.1073/pnas.0409409102
Abstract
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Biochemistry
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Biological Sciences - Biochemistry
:
Yahli Lorch
,
Barbara Davis
,
and
Roger D. Kornberg
Chromatin remodeling by DNA bending, not twisting
PNAS
2005
102
:
1329
-
1332
;
published ahead of print
January 26, 2005
,
doi:10.1073/pnas.0409413102
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Biological Sciences - Biochemistry
:
Hiroshi Ueno
,
Toshiharu Suzuki
,
Kazuhiko Kinosita, Jr.
,
and
Masasuke Yoshida
ATP-driven stepwise rotation of F o F 1 -ATP synthase
PNAS
2005
102
:
1333
-
1338
;
published ahead of print
January 24, 2005
,
doi:10.1073/pnas.0407857102
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Biological Sciences - Biochemistry
:
Paul Labhart
,
Sudipan Karmakar
,
Eleni M. Salicru
,
Brian S. Egan
,
Vassilios Alexiadis
,
Bert W. O'Malley
,
and
Carolyn L. Smith
Identification of target genes in breast cancer cells directly regulated by the SRC-3/AIB1 coactivator
PNAS
2005
102
:
1339
-
1344
;
published ahead of print
January 26, 2005
,
doi:10.1073/pnas.0409578102
Abstract
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Biological Sciences - Biochemistry
:
Erin Convery
,
Euy Kyun Shin
,
Qi Ding
,
Wei Wang
,
Pauline Douglas
,
Laurie S. Davis
,
Jac A. Nickoloff
,
Susan P. Lees-Miller
,
and
Katheryn Meek
Inhibition of homologous recombination by variants of the catalytic subunit of the DNA-dependent protein kinase (DNA-PKcs)
PNAS
2005
102
:
1345
-
1350
;
published ahead of print
January 24, 2005
,
doi:10.1073/pnas.0406466102
Abstract
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Select this article
Physical Sciences - Chemistry - Biological Sciences - Biochemistry
:
Douglass Wu
,
Guo-Wen Xing
,
Michael A. Poles
,
Amir Horowitz
,
Yuki Kinjo
,
Barbara Sullivan
,
Vera Bodmer-Narkevitch
,
Oliver Plettenburg
,
Mitchell Kronenberg
,
Moriya Tsuji
,
David D. Ho
,
and
Chi-Huey Wong
Bacterial glycolipids and analogs as antigens for CD1d-restricted NKT cells
PNAS
2005
102
:
1351
-
1356
;
published ahead of print
January 21, 2005
,
doi:10.1073/pnas.0408696102
Abstract
Full Text
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Supporting Text
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Biological Sciences - Biochemistry
:
Randen L. Patterson
,
Damian B. van Rossum
,
Adam I. Kaplin
,
Roxanne K. Barrow
,
and
Solomon H. Snyder
Inositol 1,4,5-trisphosphate receptor/GAPDH complex augments Ca 2+ release via locally derived NADH
PNAS
2005
102
:
1357
-
1359
;
published ahead of print
January 26, 2005
,
doi:10.1073/pnas.0409657102
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Biological Sciences - Biochemistry
:
Dmitri Y. Boudko
,
Andrea B. Kohn
,
Ella A. Meleshkevitch
,
Michelle K. Dasher
,
Theresa J. Seron
,
Bruce R. Stevens
,
and
William R. Harvey
Ancestry and progeny of nutrient amino acid transporters
PNAS
2005
102
:
1360
-
1365
;
published ahead of print
January 21, 2005
,
doi:10.1073/pnas.0405183101
Abstract
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Biological Sciences - Biochemistry
:
Takatsugu Kobayashi
,
Kensaku Sakamoto
,
Tetsuo Takimura
,
Ryo Sekine
,
Kelly Vincent
,
Kenji Kamata
,
Susumu Nishimura
,
and
Shigeyuki Yokoyama
Structural basis of nonnatural amino acid recognition by an engineered aminoacyl-tRNA synthetase for genetic code expansion
PNAS
2005
102
:
1366
-
1371
;
published ahead of print
January 25, 2005
,
doi:10.1073/pnas.0407039102
Abstract
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Biological Sciences - Biochemistry
:
Jonas Noeske
,
Christian Richter
,
Marc A. Grundl
,
Hamid R. Nasiri
,
Harald Schwalbe
,
and
Jens Wöhnert
An intermolecular base triple as the basis of ligand specificity and affinity in the guanine- and adenine-sensing riboswitch RNAs
PNAS
2005
102
:
1372
-
1377
;
published ahead of print
January 21, 2005
,
doi:10.1073/pnas.0406347102
Abstract
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Biological Sciences - Biochemistry
:
L. Wayne Schultz
,
Liyun Liu
,
Margaret Cegielski
,
and
J. Woodland Hastings
Crystal structure of a pH-regulated luciferase catalyzing the bioluminescent oxidation of an open tetrapyrrole
PNAS
2005
102
:
1378
-
1383
;
published ahead of print
January 21, 2005
,
doi:10.1073/pnas.0409335102
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Biological Sciences - Biochemistry
:
WonKeun Oh
,
Lutfi Abu-Elheiga
,
Parichher Kordari
,
Zeiwei Gu
,
Tattym Shaikenov
,
Subrahmanyam S. Chirala
,
and
Salih J. Wakil
Glucose and fat metabolism in adipose tissue of acetyl-CoA carboxylase 2 knockout mice
PNAS
2005
102
:
1384
-
1389
;
published ahead of print
January 26, 2005
,
doi:10.1073/pnas.0409451102
Abstract
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Biological Sciences - Biochemistry
:
Jon A. Kenniston
,
Tania A. Baker
,
and
Robert T. Sauer
Partitioning between unfolding and release of native domains during ClpXP degradation determines substrate selectivity and partial processing
PNAS
2005
102
:
1390
-
1395
;
published ahead of print
January 25, 2005
,
doi:10.1073/pnas.0409634102
Abstract
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Biophysics
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Biological Sciences - Biophysics
:
Stephanie de Bono
,
Lutz Riechmann
,
Eric Girard
,
Roger L. Williams
,
and
Greg Winter
A segment of cold shock protein directs the folding of a combinatorial protein
PNAS
2005
102
:
1396
-
1401
;
published ahead of print
January 25, 2005
,
doi:10.1073/pnas.0407298102
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Biological Sciences - Biophysics
:
G. A. Stolovitzky
,
A. Kundaje
,
G. A. Held
,
K. H. Duggar
,
C. D. Haudenschild
,
D. Zhou
,
T. J. Vasicek
,
K. D. Smith
,
A. Aderem
,
and
J. C. Roach
Statistical analysis of MPSS measurements: Application to the study of LPS-activated macrophage gene expression
PNAS
2005
102
:
1402
-
1407
;
published ahead of print
January 24, 2005
,
doi:10.1073/pnas.0406555102
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Biological Sciences - Biophysics
:
Anthony Auerbach
Gating of acetylcholine receptor channels: Brownian motion across a broad transition state
PNAS
2005
102
:
1408
-
1412
;
published ahead of print
January 21, 2005
,
doi:10.1073/pnas.0406787102
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Biological Sciences - Biophysics
:
John M. Richardson
,
Maria M. Lopez
,
and
George I. Makhatadze
Enthalpy of helix–coil transition: Missing link in rationalizing the thermodynamics of helix-forming propensities of the amino acid residues
PNAS
2005
102
:
1413
-
1418
;
published ahead of print
January 25, 2005
,
doi:10.1073/pnas.0408004102
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Biological Sciences - Biophysics
:
L. Stirling Churchman
,
Zeynep Ökten
,
Ronald S. Rock
,
John F. Dawson
,
and
James A. Spudich
Single molecule high-resolution colocalization of Cy3 and Cy5 attached to macromolecules measures intramolecular distances through time
PNAS
2005
102
:
1419
-
1423
;
published ahead of print
January 24, 2005
,
doi:10.1073/pnas.0409487102
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Biological Sciences - Biophysics
:
Wei Li
,
Douglas G. Metcalf
,
Roman Gorelik
,
Renhao Li
,
Neal Mitra
,
Vikas Nanda
,
Peter B. Law
,
James D. Lear
,
William F. DeGrado
,
and
Joel S. Bennett
A push-pull mechanism for regulating integrin function
PNAS
2005
102
:
1424
-
1429
;
published ahead of print
January 25, 2005
,
doi:10.1073/pnas.0409334102
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Biological Sciences - Biophysics
:
Carlos W. Bertoncini
,
Young-Sang Jung
,
Claudio O. Fernandez
,
Wolfgang Hoyer
,
Christian Griesinger
,
Thomas M. Jovin
,
and
Markus Zweckstetter
From the Cover: Release of long-range tertiary interactions potentiates aggregation of natively unstructured α-synuclein
PNAS
2005
102
:
1430
-
1435
;
published ahead of print
January 25, 2005
,
doi:10.1073/pnas.0407146102
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Cell Biology
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Biological Sciences - Cell Biology
:
Lori F. Maxfield
,
Camilla D. Fraize
,
and
John M. Coffin
From the Cover: Relationship between retroviral DNA-integration-site selection and host cell transcription
PNAS
2005
102
:
1436
-
1441
;
published ahead of print
January 19, 2005
,
doi:10.1073/pnas.0409204102
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1275
in issue 5 of volume 102
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Biological Sciences - Cell Biology
:
Jihee Kim
,
Seungkirl Ahn
,
Xiu-Rong Ren
,
Erin J. Whalen
,
Eric Reiter
,
Huijun Wei
,
and
Robert J. Lefkowitz
Functional antagonism of different G protein-coupled receptor kinases for β-arrestin-mediated angiotensin II receptor signaling
PNAS
2005
102
:
1442
-
1447
;
published ahead of print
January 25, 2005
,
doi:10.1073/pnas.0409532102
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Biological Sciences - Cell Biology
:
Xiu-Rong Ren
,
Eric Reiter
,
Seungkirl Ahn
,
Jihee Kim
,
Wei Chen
,
and
Robert J. Lefkowitz
Different G protein-coupled receptor kinases govern G protein and β-arrestin-mediated signaling of V2 vasopressin receptor
PNAS
2005
102
:
1448
-
1453
;
published ahead of print
January 25, 2005
,
doi:10.1073/pnas.0409534102
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Biological Sciences - Cell Biology
:
Amjad Javed
,
George L. Barnes
,
Jitesh Pratap
,
Tomasz Antkowiak
,
Louis C. Gerstenfeld
,
Andre J. van Wijnen
,
Janet L. Stein
,
Jane B. Lian
,
and
Gary S. Stein
Impaired intranuclear trafficking of Runx2 (AML3/CBFA1) transcription factors in breast cancer cells inhibits osteolysis in vivo
PNAS
2005
102
:
1454
-
1459
;
published ahead of print
January 21, 2005
,
doi:10.1073/pnas.0409121102
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Biological Sciences - Cell Biology
:
Emmelie Å. Jansson
,
Alexandra Are
,
Gediminas Greicius
,
I-Chun Kuo
,
Denise Kelly
,
Velmurugesan Arulampalam
,
and
Sven Pettersson
The Wnt/β-catenin signaling pathway targets PPARγ activity in colon cancer cells
PNAS
2005
102
:
1460
-
1465
;
published ahead of print
January 21, 2005
,
doi:10.1073/pnas.0405928102
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Biological Sciences - Cell Biology
:
Darren Boehning
,
<