PNAS — Table of Contents — March 2, 2004, 101 (9)

Commentaries

Commentary:
- Matthew Frerking
When astrocytes signal, kainate receptors respond
PNAS 2004 101:2649-2650; published ahead of print February 23, 2004, doi:10.1073/pnas.0400474101
- See companion article on page 3172 in issue 9 of volume 101
Commentary:
- C. William Birky, Jr.
Bdelloid rotifers revisited
PNAS 2004 101:2651-2652; published ahead of print February 23, 2004, doi:10.1073/pnas.0308453101
- See companion article on page 1618 in issue 6 of volume 101
- See companion article on page 1622 in issue 6 of volume 101

Perspective

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Perspective:
- Leslea J. Hlusko
Integrating the genotype and phenotype in hominid paleontology
PNAS 2004 101:2653-2657; published ahead of print February 15, 2004, doi:10.1073/pnas.0307678101

Physical Sciences

Applied Mathematics

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Physical Sciences - Applied Mathematics:
- Filippo Radicchi,
- Claudio Castellano,
- Federico Cecconi,
- Vittorio Loreto,
- and Domenico Parisi
Defining and identifying communities in networks
PNAS 2004 101:2658-2663; published ahead of print February 23, 2004, doi:10.1073/pnas.0400054101
Select this article
Physical Sciences - Applied Mathematics - Biological Sciences - Biophysics:
- Hong Qian
- and Elliot L. Elson
Fluorescence correlation spectroscopy with high-order and dual-color correlation to probe nonequilibrium steady states
PNAS 2004 101:2828-2833; published ahead of print February 17, 2004, doi:10.1073/pnas.0305962101

Chemistry

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Physical Sciences - Chemistry:
- Jaeil Bai,
- X. C. Zeng,
- Hideki Tanaka,
- and J. Y. Zeng
Metallic single-walled silicon nanotubes
PNAS 2004 101:2664-2668; published ahead of print February 23, 2004, doi:10.1073/pnas.0308467101
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Physical Sciences - Chemistry:
- Masamichi Yamanaka,
- Alexander Shivanyuk,
- and Julius Rebek, Jr.
Stereochemistry in self-assembled encapsulation complexes: Constellational isomerism
PNAS 2004 101:2669-2672; published ahead of print February 23, 2004, doi:10.1073/pnas.0308584101
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Physical Sciences - Chemistry:
- Xin Xu
- and William A. Goddard, III
From the Cover: The X3LYP extended density functional for accurate descriptions of nonbond interactions, spin states, and thermochemical properties
PNAS 2004 101:2673-2677; published ahead of print February 23, 2004, doi:10.1073/pnas.0308730100
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Physical Sciences - Chemistry:
- Andrew J. Forbes,
- Steven M. Patrie,
- Gregory K. Taylor,
- Yong-Bin Kim,
- Lihua Jiang,
- and Neil L. Kelleher
Targeted analysis and discovery of posttranslational modifications in proteins from methanogenic archaea by top-down MS
PNAS 2004 101:2678-2683; published ahead of print February 19, 2004, doi:10.1073/pnas.0306575101
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Physical Sciences - Chemistry - Biological Sciences - Biochemistry:
- Ariel Fernández,
- Ridgway Scott,
- and R. Stephen Berry
The nonconserved wrapping of conserved protein folds reveals a trend toward increasing connectivity in proteomic networks
PNAS 2004 101:2823-2827; published ahead of print February 20, 2004, doi:10.1073/pnas.0308295100

Mathematics

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Physical Sciences - Mathematics:
- José Luis Rodrigo
The vortex patch problem for the surface quasi-geostrophic equation
PNAS 2004 101:2684-2686; published ahead of print February 17, 2004, doi:10.1073/pnas.0308158101
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Physical Sciences - Mathematics:
- Diego Córdoba,
- Charles Fefferman,
- and José Luis Rodrigo
Almost sharp fronts for the surface quasi-geostrophic equation
PNAS 2004 101:2687-2691; published ahead of print February 20, 2004, doi:10.1073/pnas.0308154101

Social Sciences

Anthropology

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Biological Sciences - Evolution - Social Sciences - Anthropology:
- Monica Uddin,
- Derek E. Wildman,
- Guozhen Liu,
- Wenbo Xu,
- Robert M. Johnson,
- Patrick R. Hof,
- Gregory Kapatos,
- Lawrence I. Grossman,
- and Morris Goodman
Sister grouping of chimpanzees and humans as revealed by genome-wide phylogenetic analysis of brain gene expression profiles
PNAS 2004 101:2957-2962; published ahead of print February 19, 2004, doi:10.1073/pnas.0308725100

Psychology

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Social Sciences - Psychology:
- Stanley J. Colcombe,
- Arthur F. Kramer,
- Kirk I. Erickson,
- Paige Scalf,
- Edward McAuley,
- Neal J. Cohen,
- Andrew Webb,
- Gerry J. Jerome,
- David X. Marquez,
- and Steriani Elavsky
Cardiovascular fitness, cortical plasticity, and aging
PNAS 2004 101:3316-3321; published ahead of print February 20, 2004, doi:10.1073/pnas.0400266101

Table of Contents

FROM THE COVER

When astrocytes signal, kainate receptors respond

Bdelloid rotifers revisited

Integrating the genotype and phenotype in hominid paleontology

Defining and identifying communities in networks

Fluorescence correlation spectroscopy with high-order and dual-color correlation to probe nonequilibrium steady states

Metallic single-walled silicon nanotubes

Stereochemistry in self-assembled encapsulation complexes: Constellational isomerism

From the Cover: The X3LYP extended density functional for accurate descriptions of nonbond interactions, spin states, and thermochemical properties

Targeted analysis and discovery of posttranslational modifications in proteins from methanogenic archaea by top-down MS

The nonconserved wrapping of conserved protein folds reveals a trend toward increasing connectivity in proteomic networks

The vortex patch problem for the surface quasi-geostrophic equation

Almost sharp fronts for the surface quasi-geostrophic equation

Sister grouping of chimpanzees and humans as revealed by genome-wide phylogenetic analysis of brain gene expression profiles

Cardiovascular fitness, cortical plasticity, and aging

Impetus for sowing and the beginning of agriculture: Ground collecting of wild cereals

Induction and transmission of Bacillus thuringiensis tolerance in the flour moth Ephestia kuehniella

Copper-induced ferroportin-1 expression in J774 macrophages is associated with increased iron efflux

Structural basis of tyrosine sulfation and V H -gene usage in antibodies that recognize the HIV type 1 coreceptor-binding site on gp120

The solution structure of the N-terminal domain of E3L shows a tyrosine conformation that may explain its reduced affinity to Z-DNA in vitro

Crystal structure of the complex between thrombin and the central “E” region of fibrin

Role of interfacial amino acid residues in assembly, stability, and conformation of a spherical virus capsid

Transition state stabilization by general acid catalysis, water expulsion, and enzyme reorganization in Medicago savita chalcone isomerase

Predicted 3D structure for the human β2 adrenergic receptor and its binding site for agonists and antagonists

ADP reduces the oxygen-binding affinity of a sensory histidine kinase, FixL: The possibility of an enhanced reciprocating kinase reaction

Recycling of a regulatory protein by degradation of the RNA to which it binds

Nuclear localization and molecular partners of BIG1, a brefeldin A-inhibited guanine nucleotide-exchange protein for ADP-ribosylation factors

Global analysis of Escherichia coli RNA degradosome function using DNA microarrays

Single-molecule and transient kinetics investigation of the interaction of dihydrofolate reductase with NADPH and dihydrofolate

Two structural features of λ integrase that are critical for DNA cleavage by multimers but not by monomers

Glutamate-183 in the conserved TGES motif of domain A of sarcoplasmic reticulum Ca 2+ -ATPase assists in catalysis of E 2 / E 2 P partial reactions

Identification of critical residues in GlnB for its activation of NifA activity in the photosynthetic bacterium Rhodospirillum rubrum

Portability and fidelity of RNA-repair systems

Differential utilization of upstream AUGs in the β-secretase mRNA suggests that a shunting mechanism regulates translation

Spontaneous nucleotide exchange in low molecular weight GTPases by fluorescently labeled γ-phosphate-linked GTP analogs

CIS display: In vitro selection of peptides from libraries of protein–DNA complexes

Two discriminatory binding sites in the Escherichia coli replication origin are required for DNA strand opening by initiator DnaA-ATP

Tissue damage in the amyloidoses: Transthyretin monomers and nonnative oligomers are the major cytotoxic species in tissue culture

The nonconserved wrapping of conserved protein folds reveals a trend toward increasing connectivity in proteomic networks

Fluorescence correlation spectroscopy with high-order and dual-color correlation to probe nonequilibrium steady states

Solvation in protein folding analysis: Combination of theoretical and experimental approaches

The archaeal feast/famine regulatory protein: Potential roles of its assembly forms for regulating transcription

Imprint of evolution on protein structures

Structure of the multidrug resistance efflux transporter EmrE from Escherichia coli