PNAS — Table of Contents — September 7, 2004, 101 (36)

Commentaries

Commentary:
- Bruce R. Levin
- and Marc J. M. Bonten
Cycling antibiotics may not be good for your health
PNAS 2004 101:13101-13102; published ahead of print August 30, 2004, doi:10.1073/pnas.0404970101
- See companion article on page 13285 in issue 36 of volume 101
Commentary:
- D. James Surmeier
Homeostatic regulation of dopaminergic neurons without dopamine
PNAS 2004 101:13103-13104; published ahead of print August 30, 2004, doi:10.1073/pnas.0405217101
- See companion article on page 13329 in issue 36 of volume 101

Perspective

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Perspective:
- Peng Chen
- and Edward I. Solomon
O 2 activation by binuclear Cu sites: Noncoupled versus exchange coupled reaction mechanisms
PNAS 2004 101:13105-13110; published ahead of print August 30, 2004, doi:10.1073/pnas.0402114101

Physical Sciences

Applied Mathematics

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Physical Sciences - Applied Mathematics - Biological Sciences - Population Biology:
- Chris T. Bauch
- and David J. D. Earn
Vaccination and the theory of games
PNAS 2004 101:13391-13394; published ahead of print August 25, 2004, doi:10.1073/pnas.0403823101

Chemistry

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Physical Sciences - Chemistry - Biological Sciences - Biochemistry:
- Nelly Khidekel,
- Scott B. Ficarro,
- Eric C. Peters,
- and Linda C. Hsieh-Wilson
Exploring the O -GlcNAc proteome: Direct identification of O -GlcNAc-modified proteins from the brain
PNAS 2004 101:13132-13137; published ahead of print August 30, 2004, doi:10.1073/pnas.0403471101
Select this article
Physical Sciences - Chemistry:
- My Hang V. Huynh
- and Thomas J. Meyer
Colossal kinetic isotope effects in proton-coupled electron transfer
PNAS 2004 101:13138-13141; published ahead of print August 26, 2004, doi:10.1073/pnas.0405086101

Physics

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Physical Sciences - Physics:
- Jay D. Schieber,
- David C. Venerus,
- Kendall Bush,
- Venkat Balasubramanian,
- and Stoyan Smoukov
Measurement of anisotropic energy transport in flowing polymers by using a holographic technique
PNAS 2004 101:13142-13146; published ahead of print August 30, 2004, doi:10.1073/pnas.0405262101

Biological Sciences

Biophysics

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Biological Sciences - Biophysics:
- A. I. Jewett,
- A. Baumketner,
- and J.-E. Shea
Accelerated folding in the weak hydrophobic environment of a chaperonin cavity: Creation of an alternate fast folding pathway
PNAS 2004 101:13192-13197; published ahead of print August 26, 2004, doi:10.1073/pnas.0400720101
Select this article
Biological Sciences - Biophysics:
- Dong Hae Shin,
- Yun Lou,
- Jaru Jancarik,
- Hisao Yokota,
- Rosalind Kim,
- and Sung-Hou Kim
Crystal structure of YjeQ from Thermotoga maritima contains a circularly permuted GTPase domain
PNAS 2004 101:13198-13203; published ahead of print August 26, 2004, doi:10.1073/pnas.0405202101
Select this article
Biological Sciences - Biophysics:
- Joseph Snider,
- Francis Lin,
- Neda Zahedi,
- Vladimir Rodionov,
- Clare C. Yu,
- and Steven P. Gross
Intracellular actin-based transport: How far you go depends on how often you switch
PNAS 2004 101:13204-13209; published ahead of print August 26, 2004, doi:10.1073/pnas.0403092101
Select this article
Biological Sciences - Biophysics:
- Jörg Stelling,
- Ernst Dieter Gilles,
- and Francis J. Doyle, III
From the Cover: Robustness properties of circadian clock architectures
PNAS 2004 101:13210-13215; published ahead of print August 30, 2004, doi:10.1073/pnas.0401463101
Select this article
Biological Sciences - Biophysics:
- Cathie Ventalon,
- James M. Fraser,
- Marten H. Vos,
- Antigoni Alexandrou,
- Jean-Louis Martin,
- and Manuel Joffre
Coherent vibrational climbing in carboxyhemoglobin
PNAS 2004 101:13216-13220; published ahead of print August 19, 2004, doi:10.1073/pnas.0401844101

Cell Biology

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Biological Sciences - Cell Biology:
- Sabine M. Görisch,
- Malte Wachsmuth,
- Carina Ittrich,
- Christian P. Bacher,
- Karsten Rippe,
- and Peter Lichter
Nuclear body movement is determined by chromatin accessibility and dynamics
PNAS 2004 101:13221-13226; published ahead of print August 26, 2004, doi:10.1073/pnas.0402958101
Select this article
Biological Sciences - Cell Biology:
- Christopher Horst Lillig,
- Maria Elisabet Lönn,
- Mari Enoksson,
- Aristi Potamitou Fernandes,
- and Arne Holmgren
Short interfering RNA-mediated silencing of glutaredoxin 2 increases the sensitivity of HeLa cells toward doxorubicin and phenylarsine oxide
PNAS 2004 101:13227-13232; published ahead of print August 24, 2004, doi:10.1073/pnas.0401896101
Select this article
Biological Sciences - Cell Biology:
- Takao Inoue,
- Asako Sugimoto,
- Yuka Suzuki,
- Masayuki Yamamoto,
- Masafumi Tsujimoto,
- Keizo Inoue,
- Junken Aoki,
- and Hiroyuki Arai
Type II platelet-activating factor-acetylhydrolase is essential for epithelial morphogenesis in Caenorhabditis elegans
PNAS 2004 101:13233-13238; published ahead of print August 30, 2004, doi:10.1073/pnas.0405507101
Select this article
Biological Sciences - Cell Biology:
- Chih-Chuan Chang,
- Jonathan D. Heller,
- Jennifer Kuo,
- and Ru Chih C. Huang
Tetra- O -methyl nordihydroguaiaretic acid induces growth arrest and cellular apoptosis by inhibiting Cdc2 and survivin expression
PNAS 2004 101:13239-13244; published ahead of print August 25, 2004, doi:10.1073/pnas.0405407101

Developmental Biology

Select this article
Biological Sciences - Developmental Biology:
- Rosa Gasa,
- Caroline Mrejen,
- Nathaniel Leachman,
- Marc Otten,
- Michael Barnes,
- Juehu Wang,
- Swarup Chakrabarti,
- Raghavendra Mirmira,
- and Michael German
Proendocrine genes coordinate the pancreatic islet differentiation program in vitro
PNAS 2004 101:13245-13250; published ahead of print August 30, 2004, doi:10.1073/pnas.0405301101

Evolution

Select this article
Biological Sciences - Evolution:
- Takashi Angata,
- Elliott H. Margulies,
- Eric D. Green,
- and Ajit Varki
Large-scale sequencing of the CD33-related Siglec gene cluster in five mammalian species reveals rapid evolution by multiple mechanisms
PNAS 2004 101:13251-13256; published ahead of print August 26, 2004, doi:10.1073/pnas.0404833101

Genetics

Select this article
Biological Sciences - Genetics:
- Yoonsoo Hahn,
- Tapan Kumar Bera,
- Kristen Gehlhaus,
- Ilan R. Kirsch,
- Ira H. Pastan,
- and Byungkook Lee
Finding fusion genes resulting from chromosome rearrangement by analyzing the expressed sequence databases
PNAS 2004 101:13257-13261; published ahead of print August 23, 2004, doi:10.1073/pnas.0405490101
Select this article
Biological Sciences - Genetics:
- Christopher D. Putnam,
- Vincent Pennaneach,
- and Richard D. Kolodner
Chromosome healing through terminal deletions generated by de novo telomere additions in Saccharomyces cerevisiae
PNAS 2004 101:13262-13267; published ahead of print August 24, 2004, doi:10.1073/pnas.0405443101

Immunology

Select this article
Biological Sciences - Immunology:
- Sorin Istrail,
- Liliana Florea,
- Bjarni V. Halldórsson,
- Oliver Kohlbacher,
- Russell S. Schwartz,
- Von Bing Yap,
- Jonathan W. Yewdell,
- and Stephen L. Hoffman
Comparative immunopeptidomics of humans and their pathogens
PNAS 2004 101:13268-13272; published ahead of print August 23, 2004, doi:10.1073/pnas.0404740101
Select this article
Biological Sciences - Immunology:
- Zeev Pancer,
- Werner E. Mayer,
- Jan Klein,
- and Max D. Cooper
Prototypic T cell receptor and CD4-like coreceptor are expressed by lymphocytes in the agnathan sea lamprey
PNAS 2004 101:13273-13278; published ahead of print August 24, 2004, doi:10.1073/pnas.0405529101
Select this article
Biological Sciences - Immunology:
- Zarixia Zavala-Ruiz,
- Iwona Strug,
- Bruce D. Walker,
- Philip J. Norris,
- and Lawrence J. Stern
A hairpin turn in a class II MHC-bound peptide orients residues outside the binding groove for T cell recognition
PNAS 2004 101:13279-13284; published ahead of print August 26, 2004, doi:10.1073/pnas.0403371101

Medical Sciences

Select this article
Biological Sciences - Medical Sciences:
- Carl T. Bergstrom,
- Monique Lo,
- and Marc Lipsitch
From the Cover: Ecological theory suggests that antimicrobial cycling will not reduce antimicrobial resistance in hospitals
PNAS 2004 101:13285-13290; published ahead of print August 12, 2004, doi:10.1073/pnas.0402298101
- See commentary article on page 13101 in issue 36 of volume 101
Select this article
Biological Sciences - Medical Sciences:
- Yasuyuki Amoh,
- Lingna Li,
- Meng Yang,
- A. R. Moossa,
- Kensei Katsuoka,
- Sheldon Penman,
- and Robert M. Hoffman
Nascent blood vessels in the skin arise from nestin-expressing hair-follicle cells
PNAS 2004 101:13291-13295; published ahead of print August 26, 2004, doi:10.1073/pnas.0405250101
Select this article
Biological Sciences - Medical Sciences:
- Therese Wiedmer,
- Ji Zhao,
- Lilin Li,
- Quansheng Zhou,
- Andrea Hevener,
- Jerrold M. Olefsky,
- Linda K. Curtiss,
- and Peter J. Sims
Adiposity, dyslipidemia, and insulin resistance in mice with targeted deletion of phospholipid scramblase 3 ( PLSCR3 )
PNAS 2004 101:13296-13301; published ahead of print August 24, 2004, doi:10.1073/pnas.0405354101
Select this article
Biological Sciences - Medical Sciences:
- Masao Kakoki,
- Nobuyuki Takahashi,
- J. Charles Jennette,
- and Oliver Smithies
Diabetic nephropathy is markedly enhanced in mice lacking the bradykinin B2 receptor
PNAS 2004 101:13302-13305; published ahead of print August 23, 2004, doi:10.1073/pnas.0405449101
Select this article
Biological Sciences - Medical Sciences:
- William Pao,
- Vincent Miller,
- Maureen Zakowski,
- Jennifer Doherty,
- Katerina Politi,
- Inderpal Sarkaria,
- Bhuvanesh Singh,
- Robert Heelan,
- Valerie Rusch,
- Lucinda Fulton,
- Elaine Mardis,
- Doris Kupfer,
- Richard Wilson,
- Mark Kris,
- and Harold Varmus
EGF receptor gene mutations are common in lung cancers from “never smokers” and are associated with sensitivity of tumors to gefitinib and erlotinib
PNAS 2004 101:13306-13311; published ahead of print August 25, 2004, doi:10.1073/pnas.0405220101
Select this article
Biological Sciences - Medical Sciences:
- Daniel Helbling,
- Beatrice U. Mueller,
- Nikolai A. Timchenko,
- Anne Hagemeijer,
- Martine Jotterand,
- Sandrine Meyer-Monard,
- Andrew Lister,
- Janet D. Rowley,
- Barbara Huegli,
- Martin F. Fey,
- and Thomas Pabst
The leukemic fusion gene AML1-MDS1-EVI1 suppresses CEBPA in acute myeloid leukemia by activation of Calreticulin
PNAS 2004 101:13312-13317; published ahead of print August 23, 2004, doi:10.1073/pnas.0404731101

Microbiology

Select this article
Biological Sciences - Microbiology:
- Roxana Malpica,
- Bernardo Franco,
- Claudia Rodriguez,
- Ohsuk Kwon,
- and Dimitris Georgellis
Identification of a quinone-sensitive redox switch in the ArcB sensor kinase
PNAS 2004 101:13318-13323; published ahead of print August 23, 2004, doi:10.1073/pnas.0403064101
Select this article
Biological Sciences - Microbiology:
- Sébastien Nisole,
- Clare Lynch,

Table of Contents

FROM THE COVER

Cycling antibiotics may not be good for your health

Homeostatic regulation of dopaminergic neurons without dopamine

O 2 activation by binuclear Cu sites: Noncoupled versus exchange coupled reaction mechanisms

Vaccination and the theory of games

Exploring the O -GlcNAc proteome: Direct identification of O -GlcNAc-modified proteins from the brain

Colossal kinetic isotope effects in proton-coupled electron transfer

Measurement of anisotropic energy transport in flowing polymers by using a holographic technique

Inaugural Article: Biography of Barry S. Coller

Inaugural Article: Integrin β3 regions controlling binding of murine mAb 7E3: Implications for the mechanism of integrin αIIbβ3 activation

Exploring the O -GlcNAc proteome: Direct identification of O -GlcNAc-modified proteins from the brain

Structure of heptameric protective antigen bound to an anthrax toxin receptor: A role for receptor in pH-dependent pore formation

Anticorrelated motions as a driving force in enzyme catalysis: The dehydrogenase reaction

Crystal structure of a Baeyer–Villiger monooxygenase

Incorporation of a single His residue by rational design enables thiol-ester hydrolysis by human glutathione transferase A1-1

Universality in intermediary metabolism

Inhibition of ghrelin action in vitro and in vivo by an RNA-Spiegelmer

Mapping activation and repression domains of the vnd/NK-2 homeodomain protein

A trypanothione-dependent glyoxalase I with a prokaryotic ancestry in Leishmania major

Accelerated folding in the weak hydrophobic environment of a chaperonin cavity: Creation of an alternate fast folding pathway

Crystal structure of YjeQ from Thermotoga maritima contains a circularly permuted GTPase domain

Intracellular actin-based transport: How far you go depends on how often you switch

From the Cover: Robustness properties of circadian clock architectures

Coherent vibrational climbing in carboxyhemoglobin

Nuclear body movement is determined by chromatin accessibility and dynamics

Short interfering RNA-mediated silencing of glutaredoxin 2 increases the sensitivity of HeLa cells toward doxorubicin and phenylarsine oxide

Type II platelet-activating factor-acetylhydrolase is essential for epithelial morphogenesis in Caenorhabditis elegans

Tetra- O -methyl nordihydroguaiaretic acid induces growth arrest and cellular apoptosis by inhibiting Cdc2 and survivin expression

Proendocrine genes coordinate the pancreatic islet differentiation program in vitro

Large-scale sequencing of the CD33-related Siglec gene cluster in five mammalian species reveals rapid evolution by multiple mechanisms

Finding fusion genes resulting from chromosome rearrangement by analyzing the expressed sequence databases

Chromosome healing through terminal deletions generated by de novo telomere additions in Saccharomyces cerevisiae

Comparative immunopeptidomics of humans and their pathogens

Prototypic T cell receptor and CD4-like coreceptor are expressed by lymphocytes in the agnathan sea lamprey

A hairpin turn in a class II MHC-bound peptide orients residues outside the binding groove for T cell recognition

From the Cover: Ecological theory suggests that antimicrobial cycling will not reduce antimicrobial resistance in hospitals

Nascent blood vessels in the skin arise from nestin-expressing hair-follicle cells

Adiposity, dyslipidemia, and insulin resistance in mice with targeted deletion of phospholipid scramblase 3 ( PLSCR3 )

Diabetic nephropathy is markedly enhanced in mice lacking the bradykinin B2 receptor

EGF receptor gene mutations are common in lung cancers from “never smokers” and are associated with sensitivity of tumors to gefitinib and erlotinib

The leukemic fusion gene AML1-MDS1-EVI1 suppresses CEBPA in acute myeloid leukemia by activation of Calreticulin

Identification of a quinone-sensitive redox switch in the ArcB sensor kinase