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Proceedings of the National Academy of Sciences of the United States of America
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Table of Contents
March 23, 2004; 101 (12)
Index By Author
Cover Photo
FROM THE COVER
Dynamics of HIV-1 recombination
Solvent evaporation creates nanotube foams
Measuring lipid contribution to protein folding
Predicting activity of engineered enzymes
Sleep apnea and motoneuron excitability
Commentaries
Commentary
:
J. Woodland Hastings
Bacterial quorum-sensing signals are inactivated by mammalian cells
PNAS
2004
101
:
3993
-
3994
;
published ahead of print
March 15, 2004
,
doi:10.1073/pnas.0400874101
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3587
in issue 10 of volume 101
Commentary
:
James U. Bowie
Membrane proteins: A new method enters the fold
PNAS
2004
101
:
3995
-
3996
;
published ahead of print
March 15, 2004
,
doi:10.1073/pnas.0400671101
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See companion article on page
4065
in issue 12 of volume 101
Commentary
:
Michael W. Deem
Evolution and evolvability of proteins in the laboratory
PNAS
2004
101
:
3997
-
3998
;
published ahead of print
March 15, 2004
,
doi:10.1073/pnas.0400475101
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See companion article on page
4142
in issue 12 of volume 101
Perspectives
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Perspective
:
Charles A. Holt
and
Alvin E. Roth
The Nash equilibrium: A perspective
PNAS
2004
101
:
3999
-
4002
;
published ahead of print
March 15, 2004
,
doi:10.1073/pnas.0308738101
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Perspective
:
Rafael Radi
Nitric oxide, oxidants, and protein tyrosine nitration
PNAS
2004
101
:
4003
-
4008
;
published ahead of print
March 12, 2004
,
doi:10.1073/pnas.0307446101
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Physical Sciences
Applied Physical Sciences
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Physical Sciences - Applied Physical Sciences
:
Nirupama Chakrapani
,
Bingqing Wei
,
Alvaro Carrillo
,
Pulickel M. Ajayan
,
and
Ravi S. Kane
From the Cover: Capillarity-driven assembly of two-dimensional cellular carbon nanotube foams
PNAS
2004
101
:
4009
-
4012
;
published ahead of print
March 11, 2004
,
doi:10.1073/pnas.0400734101
Abstract
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See commentary article on page
6331
in issue 17 of volume 101
Physics
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Physical Sciences - Physics
:
B. Edwards
and
N. W. Ashcroft
Order in dense hydrogen at low temperatures
PNAS
2004
101
:
4013
-
4018
;
published ahead of print
March 17, 2004
,
doi:10.1073/pnas.0307331101
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Physical Sciences - Physics
:
Davide Iannuzzi
,
Mariangela Lisanti
,
and
Federico Capasso
Effect of hydrogen-switchable mirrors on the Casimir force
PNAS
2004
101
:
4019
-
4023
;
published ahead of print
March 15, 2004
,
doi:10.1073/pnas.0400876101
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Social Sciences
Anthropology
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Social Sciences - Anthropology
:
Tom D. Dillehay
and
Alan L. Kolata
Long-term human response to uncertain environmental conditions in the Andes
PNAS
2004
101
:
4325
-
4330
;
published ahead of print
March 15, 2004
,
doi:10.1073/pnas.0400538101
Abstract
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Biological Sciences
Agricultural Sciences
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Biological Sciences - Agricultural Sciences
:
C. Helvig
,
J. F. Koener
,
G. C. Unnithan
,
and
R. Feyereisen
CYP15A1, the cytochrome P450 that catalyzes epoxidation of methyl farnesoate to juvenile hormone III in cockroach corpora allata
PNAS
2004
101
:
4024
-
4029
;
published ahead of print
March 15, 2004
,
doi:10.1073/pnas.0306980101
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Biochemistry
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Biological Sciences - Biochemistry
:
Brian A. Van Tine
,
Luan D. Dao
,
Shwu-Yuan Wu
,
Timothy M. Sonbuchner
,
Biing Yuan Lin
,
Nianxiang Zou
,
Cheng-Ming Chiang
,
Thomas R. Broker
,
and
Louise T. Chow
Human papillomavirus (HPV) origin-binding protein associates with mitotic spindles to enable viral DNA partitioning
PNAS
2004
101
:
4030
-
4035
;
published ahead of print
March 12, 2004
,
doi:10.1073/pnas.0306848101
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Biological Sciences - Biochemistry
:
Chi-Yong Eom
,
Won Do Heo
,
Madeleine L. Craske
,
Tobias Meyer
,
and
I. Robert Lehman
The neural F-box protein NFB42 mediates the nuclear export of the herpes simplex virus type 1 replication initiator protein (UL9 protein) after viral infection
PNAS
2004
101
:
4036
-
4040
;
published ahead of print
March 9, 2004
,
doi:10.1073/pnas.0400738101
Abstract
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Biological Sciences - Biochemistry
:
Kalyan Das
,
Thomas Acton
,
Yiwen Chiang
,
Lydia Shih
,
Eddy Arnold
,
and
Gaetano T. Montelione
Crystal structure of RlmA I : Implications for understanding the 23S rRNA G745/G748-methylation at the macrolide antibiotic-binding site
PNAS
2004
101
:
4041
-
4046
;
published ahead of print
March 3, 2004
,
doi:10.1073/pnas.0400189101
Abstract
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Biological Sciences - Biochemistry
:
Chih-Cheng Tsai
,
Hung-Ying Kao
,
Akifumi Mitzutani
,
Ester Banayo
,
Harini Rajan
,
Michael McKeown
,
and
Ronald M. Evans
Ataxin 1, a SCA1 neurodegenerative disorder protein, is functionally linked to the silencing mediator of retinoid and thyroid hormone receptors
PNAS
2004
101
:
4047
-
4052
;
published ahead of print
March 11, 2004
,
doi:10.1073/pnas.0400615101
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Biological Sciences - Biochemistry
:
Akihiko Komuro
,
Yutaka Masuda
,
Koichi Kobayashi
,
Roger Babbitt
,
Murat Gunel
,
Richard A. Flavell
,
and
Vincent T. Marchesi
The AHNAKs are a class of giant propeller-like proteins that associate with calcium channel proteins of cardiomyocytes and other cells
PNAS
2004
101
:
4053
-
4058
;
published ahead of print
March 8, 2004
,
doi:10.1073/pnas.0308619101
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Biological Sciences - Biochemistry
:
Peng Fang
,
Christina C. Spevak
,
Cheng Wu
,
and
Matthew S. Sachs
A nascent polypeptide domain that can regulate translation elongation
PNAS
2004
101
:
4059
-
4064
;
published ahead of print
March 12, 2004
,
doi:10.1073/pnas.0400554101
Abstract
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Biophysics
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Biological Sciences - Biophysics
:
Heedeok Hong
and
Lukas K. Tamm
From the Cover: Elastic coupling of integral membrane protein stability to lipid bilayer forces
PNAS
2004
101
:
4065
-
4070
;
published ahead of print
February 27, 2004
,
doi:10.1073/pnas.0400358101
Abstract
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See commentary article on page
3995
in issue 12 of volume 101
Select this article
Biological Sciences - Biophysics
:
Paul Wiggins
and
Rob Phillips
Analytic models for mechanotransduction: Gating a mechanosensitive channel
PNAS
2004
101
:
4071
-
4076
;
published ahead of print
March 15, 2004
,
doi:10.1073/pnas.0307804101
Abstract
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Supporting Text
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Biological Sciences - Biophysics
:
Christopher D. Snow
,
Linlin Qiu
,
Deguo Du
,
Feng Gai
,
Stephen J. Hagen
,
and
Vijay S. Pande
Trp zipper folding kinetics by molecular dynamics and temperature-jump spectroscopy
PNAS
2004
101
:
4077
-
4082
;
published ahead of print
March 12, 2004
,
doi:10.1073/pnas.0305260101
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Supporting Information
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Biological Sciences - Biophysics
:
Kakoli Mitra
,
Iban Ubarretxena-Belandia
,
Tomohiko Taguchi
,
Graham Warren
,
and
Donald M. Engelman
Modulation of the bilayer thickness of exocytic pathway membranes by membrane proteins rather than cholesterol
PNAS
2004
101
:
4083
-
4088
;
published ahead of print
March 11, 2004
,
doi:10.1073/pnas.0307332101
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Biological Sciences - Biophysics
:
Tara N. Niraula
,
Takashi Konno
,
Hua Li
,
Hiroaki Yamada
,
Kazuyuki Akasaka
,
and
Hideki Tachibana
Pressure-dissociable reversible assembly of intrinsically denatured lysozyme is a precursor for amyloid fibrils
PNAS
2004
101
:
4089
-
4093
;
published ahead of print
March 11, 2004
,
doi:10.1073/pnas.0305798101
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Biological Sciences - Biophysics
:
Olga Vinogradova
,
Julia Vaynberg
,
Xiangming Kong
,
Thomas A. Haas
,
Edward F. Plow
,
and
Jun Qin
Membrane-mediated structural transitions at the cytoplasmic face during integrin activation
PNAS
2004
101
:
4094
-
4099
;
published ahead of print
March 15, 2004
,
doi:10.1073/pnas.0400742101
Abstract
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Supporting Figures
Cell Biology
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Biological Sciences - Cell Biology
:
Frank Boellmann
,
Toumy Guettouche
,
Yongle Guo
,
Mary Fenna
,
Laila Mnayer
,
and
Richard Voellmy
DAXX interacts with heat shock factor 1 during stress activation and enhances its transcriptional activity
PNAS
2004
101
:
4100
-
4105
;
published ahead of print
March 11, 2004
,
doi:10.1073/pnas.0304768101
Abstract
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Biological Sciences - Cell Biology
:
Daniela Vallone
,
Srinivas Babu Gondi
,
David Whitmore
,
and
Nicholas S. Foulkes
E-box function in a period gene repressed by light
PNAS
2004
101
:
4106
-
4111
;
published ahead of print
March 15, 2004
,
doi:10.1073/pnas.0305436101
Abstract
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Biological Sciences - Cell Biology
:
Jacob B. Hansen
,
Claus Jørgensen
,
Rasmus K. Petersen
,
Philip Hallenborg
,
Rita De Matteis
,
Hans A. Bøye
,
Natasa Petrovic
,
Sven Enerbäck
,
Jan Nedergaard
,
Saverio Cinti
,
Hein te Riele
,
and
Karsten Kristiansen
Retinoblastoma protein functions as a molecular switch determining white versus brown adipocyte differentiation
PNAS
2004
101
:
4112
-
4117
;
published ahead of print
March 15, 2004
,
doi:10.1073/pnas.0301964101
Abstract
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Supporting Information
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Biological Sciences - Cell Biology
:
Maria A. Ferraiuolo
,
Chung-Sheng Lee
,
Lian Wee Ler
,
Jeanne L. Hsu
,
Mauro Costa-Mattioli
,
Ming-Juan Luo
,
Robin Reed
,
and
Nahum Sonenberg
A nuclear translation-like factor eIF4AIII is recruited to the mRNA during splicing and functions in nonsense-mediated decay
PNAS
2004
101
:
4118
-
4123
;
published ahead of print
March 15, 2004
,
doi:10.1073/pnas.0400933101
Abstract
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Biological Sciences - Cell Biology
:
Krisada Sakchaisri
,
Satoshi Asano
,
Li-Rong Yu
,
Mark J. Shulewitz
,
Chong J. Park
,
Jung-Eun Park
,
Young-Wook Cho
,
Timothy D. Veenstra
,
Jeremy Thorner
,
and
Kyung S. Lee
Coupling morphogenesis to mitotic entry
PNAS
2004
101
:
4124
-
4129
;
published ahead of print
March 22, 2004
,
doi:10.1073/pnas.0400641101
Abstract
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Biological Sciences - Cell Biology
:
Shao-Hua Yang
,
Ran Liu
,
Evelyn J. Perez
,
Yi Wen
,
Stanley M. Stevens, Jr.
,
Thomas Valencia
,
Anne-Marie Brun-Zinkernagel
,
Laszlo Prokai
,
Yvonne Will
,
James Dykens
,
Peter Koulen
,
and
James W. Simpkins
Mitochondrial localization of estrogen receptor β
PNAS
2004
101
:
4130
-
4135
;
published ahead of print
March 15, 2004
,
doi:10.1073/pnas.0306948101
Abstract
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Ecology
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Biological Sciences - Ecology
:
Gregory J. McCabe
,
Michael A. Palecki
,
and
Julio L. Betancourt
Pacific and Atlantic Ocean influences on multidecadal drought frequency in the United States
PNAS
2004
101
:
4136
-
4141
;
published ahead of print
March 11, 2004
,
doi:10.1073/pnas.0306738101
Abstract
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Evolution
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Biological Sciences - Evolution
:
Manish C. Saraf
,
Alexander R. Horswill
,
Stephen J. Benkovic
,
and
Costas D. Maranas
From the Cover: FamClash: A method for ranking the activity of engineered enzymes
PNAS
2004
101
:
4142
-
4147
;
published ahead of print
February 23, 2004
,
doi:10.1073/pnas.0400065101
Abstract
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See commentary article on page
3997
in issue 12 of volume 101
Select this article
Biological Sciences - Evolution
:
John D. Lewis
,
Núria Saperas
,
Yue Song
,
Maria Jose Zamora
,
Manel Chiva
,
and
Juan Ausió
Histone H1 and the origin of protamines
PNAS
2004
101
:
4148
-
4152
;
published ahead of print
March 15, 2004
,
doi:10.1073/pnas.0308721101
Abstract
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Genetics
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Biological Sciences - Genetics
:
Reeta Prusty
,
Paula Grisafi
,
and
Gerald R. Fink
The plant hormone indoleacetic acid induces invasive growth in Saccharomyces cerevisiae
PNAS
2004
101
:
4153
-
4157
;
published ahead of print
March 9, 2004
,
doi:10.1073/pnas.0400659101
Abstract
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Biological Sciences - Genetics
:
Bob Y. Liu
,
Sean P. McDermott
,
Shariq S. Khwaja
,
and
Caroline M. Alexander
The transforming activity of Wnt effectors correlates with their ability to induce the accumulation of mammary progenitor cells
PNAS
2004
101
:
4158
-
4163
;
published ahead of print
March 12, 2004
,
doi:10.1073/pnas.0400699101
Abstract
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Biological Sciences - Genetics
:
Jean-Philippe Brunet
,
Pablo Tamayo
,
Todd R. Golub
,
and
Jill P. Mesirov
Metagenes and molecular pattern discovery using matrix factorization
PNAS
2004
101
:
4164
-
4169
;
published ahead of print
March 11, 2004
,
doi:10.1073/pnas.0308531101
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Biological Sciences - Genetics
:
Eishou Matsuda
,
Toshiaki Shigeoka
,
Ryuji Iida
,
Shinya Yamanaka
,
Masashi Kawaichi
,
and
Yasumasa Ishida
Expression profiling with arrays of randomly disrupted genes in mouse embryonic stem cells leads to in vivo functional analysis
PNAS
2004
101
:
4170
-
4174
;
published ahead of print
March 9, 2004
,
doi:10.1073/pnas.0400604101
Abstract
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Immunology
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Biological Sciences - Immunology
:
Chu-Young Kim
,
Hanne Quarsten
,
Elin Bergseng
,
Chaitan Khosla
,
and
Ludvig M. Sollid
Structural basis for HLA-DQ2-mediated presentation of gluten epitopes in celiac disease
PNAS
2004
101
:
4175
-
4179
;
published ahead of print
March 12, 2004
,
doi:10.1073/pnas.0306885101
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Biological Sciences - Immunology
:
Annalise M. Martin
,
David Nolan
,
Silvana Gaudieri
,
Coral Ann Almeida
,
Richard Nolan
,
Ian James
,
Filipa Carvalho
,
Elizabeth Phillips
,
Frank T. Christiansen
,
Anthony W. Purcell
,
James McCluskey
,
and
Simon Mallal
Predisposition to abacavir hypersensitivity conferred by HLA-B * 5701 and a haplotypic Hsp70-Hom variant
PNAS
2004
101
:
4180
-
4185
;
published ahead of print
March 15, 2004
,
doi:10.1073/pnas.0307067101
Abstract
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Biological Sciences - Immunology
:
Theresa L. Gioannini
,
Athmane Teghanemt
,
DeSheng Zhang
,
Nathan P. Coussens
,
Wendie Dockstader
,
S. Ramaswamy
,
and
Jerrold P. Weiss
Isolation of an endotoxin–MD-2 complex that produces Toll-like receptor 4-dependent cell activation at picomolar concentrations
PNAS
2004
101
:
4186
-
4191
;
published ahead of print
March 9, 2004
,
doi:10.1073/pnas.0306906101
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Biological Sciences - Immunology
:
Masako Kohyama
,
Daisuke Sugahara
,
Shigeru Sugiyama
,
Hideo Yagita
,
Ko Okumura
,
and
Nobumichi Hozumi
Inducible costimulator-dependent IL-10 production by regulatory T cells specific for self-antigen
PNAS
2004
101
:
4192
-
4197
;
published ahead of print
March 10, 2004
,
doi:10.1073/pnas.0400214101
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Medical Sciences
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Biological Sciences - Medical Sciences
:
Nicolas Genoud
,
Axel Behrens
,
Gino Miele
,
Dimitri Robay
,
Frank L. Heppner
,
Stefan Freigang
,
and
Adriano Aguzzi
Disruption of Doppel prevents neurodegeneration in mice with extensive Prnp deletions
PNAS
2004
101
:
4198
-
4203
;
published ahead of print
March 8, 2004
,
doi:10.1073/pnas.0400131101
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Biological Sciences - Medical Sciences
:
David N. Levy
,
Grace M. Aldrovandi
,
Olaf Kutsch
,
and
George M. Shaw
From the Cover: Dynamics of HIV-1 recombination in its natural target cells
PNAS
2004
101
:
4204
-
4209
;
published ahead of print
March 9, 2004
,
doi:10.1073/pnas.0306764101
Abstract
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Biological Sciences - Medical Sciences