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Proceedings of the National Academy of Sciences of the United States of America
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Table of Contents
November 11, 2003; 100 (23)
Index By Author
Cover Photo
FROM THE COVER
Differentiating stem cells into cochlear hair cells
Conformational flexibility of cytochrome P450
Another histone modification for transcriptional repression
Imprinted paternal genes and tumor risk
Similar neural mechanisms for forgetting and remembering
Commentaries
Commentary
:
Dafna Nathan
,
David E. Sterner
,
and
Shelley L. Berger
Histone modifications: Now summoning sumoylation
PNAS
2003
100
:
13118
-
13120
;
published ahead of print
November 3, 2003
,
doi:10.1073/pnas.2436173100
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See companion article on page
13225
in issue 23 of volume 100
Commentary
:
Thomas L. Poulos
Cytochrome P450 flexibility
PNAS
2003
100
:
13121
-
13122
;
published ahead of print
November 3, 2003
,
doi:10.1073/pnas.2336095100
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See companion article on page
13196
in issue 23 of volume 100
Commentary
:
Larry Cahill
Similar neural mechanisms for emotion-induced memory impairment and enhancement
PNAS
2003
100
:
13123
-
13124
;
published ahead of print
November 4, 2003
,
doi:10.1073/pnas.2335833100
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See companion article on page
13626
in issue 23 of volume 100
Editorial
Editorial
:
Nicholas R. Cozzarelli
,
Kenneth R. Fulton
,
Diane M. Sullenberger
,
and
Bridget C. Coughlin
Biographies of newly elected Academy members
PNAS
2003
100
:
13117
;
published ahead of print
November 3, 2003
,
doi:10.1073/pnas.2536811100
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Biography
Biography
:
Christen Brownlee
Inaugural Article: Biography of John Bongaarts
PNAS
2003
100
:
13125
-
13126
;
published ahead of print
November 3, 2003
,
doi:10.1073/pnas.2536633100
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See commentary article on page
13127
in issue 23 of volume 100
Physical Sciences
Applied Mathematics
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Physical Sciences - Applied Mathematics
:
Iman Famili
,
Jochen Förster
,
Jens Nielsen
,
and
Bernhard O. Palsson
Saccharomyces cerevisiae phenotypes can be predicted by using constraint-based analysis of a genome-scale reconstructed metabolic network
PNAS
2003
100
:
13134
-
13139
;
published ahead of print
October 24, 2003
,
doi:10.1073/pnas.2235812100
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Chemistry
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Physical Sciences - Chemistry
:
Michael M. Rosenblatt
,
Jiangyun Wang
,
and
Kenneth S. Suslick
De novo designed cyclic-peptide heme complexes
PNAS
2003
100
:
13140
-
13145
;
published ahead of print
October 31, 2003
,
doi:10.1073/pnas.2231273100
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Physical Sciences - Chemistry
:
Johan Hofkens
,
Mircea Cotlet
,
Tom Vosch
,
Philip Tinnefeld
,
Kenneth D. Weston
,
Christophe Ego
,
Andrew Grimsdale
,
Klaus Müllen
,
David Beljonne
,
Jean Luc Brédas
,
Sven Jordens
,
Gerd Schweitzer
,
Markus Sauer
,
and
Frans De Schryver
Revealing competitive Förster-type resonance energy-transfer pathways in single bichromophoric molecules
PNAS
2003
100
:
13146
-
13151
;
published ahead of print
October 28, 2003
,
doi:10.1073/pnas.2235805100
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Engineering
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Physical Sciences - Engineering - Biological Sciences - Medical Sciences
:
Shunichi Fukuda
and
Geert W. Schmid-Schönbein
Regulation of CD18 expression on neutrophils in response to fluid shear stress
PNAS
2003
100
:
13152
-
13157
;
published ahead of print
October 31, 2003
,
doi:10.1073/pnas.2336130100
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Geophysics
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Physical Sciences - Geophysics
:
P. C. D. Milly
,
A. Cazenave
,
and
C. Gennero
Contribution of climate-driven change in continental water storage to recent sea-level rise
PNAS
2003
100
:
13158
-
13161
;
published ahead of print
October 23, 2003
,
doi:10.1073/pnas.2134014100
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Physics
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Physical Sciences - Physics
:
Navin Khaneja
,
Burkhard Luy
,
and
Steffen J. Glaser
Boundary of quantum evolution under decoherence
PNAS
2003
100
:
13162
-
13166
;
published ahead of print
October 31, 2003
,
doi:10.1073/pnas.2134111100
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Supporting Information
Statistics
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Physical Sciences - Statistics
:
Li Liu
,
Douglas M. Hawkins
,
Sujoy Ghosh
,
and
S. Stanley Young
Robust singular value decomposition analysis of microarray data
PNAS
2003
100
:
13167
-
13172
;
published ahead of print
October 27, 2003
,
doi:10.1073/pnas.1733249100
Abstract
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Biological Sciences
Anthropology
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Biological Sciences - Anthropology
:
Laurent Marivaux
,
Yaowalak Chaimanee
,
Stéphane Ducrocq
,
Bernard Marandat
,
Jean Sudre
,
Aung Naing Soe
,
Soe Thura Tun
,
Wanna Htoon
,
and
Jean-Jacques Jaeger
The anthropoid status of a primate from the late middle Eocene Pondaung Formation (Central Myanmar): Tarsal evidence
PNAS
2003
100
:
13173
-
13178
;
published ahead of print
October 31, 2003
,
doi:10.1073/pnas.2332542100
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Biochemistry
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Biological Sciences - Biochemistry
:
Christine M. Angevine
,
Kelly A. G. Herold
,
and
Robert H. Fillingame
Aqueous access pathways in subunit a of rotary ATP synthase extend to both sides of the membrane
PNAS
2003
100
:
13179
-
13183
;
published ahead of print
October 31, 2003
,
doi:10.1073/pnas.2234364100
Abstract
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Biological Sciences - Biochemistry
:
Dirk Hoffmeister
,
Jie Yang
,
Lesley Liu
,
and
Jon S. Thorson
Creation of the first anomeric d / l -sugar kinase by means of directed evolution
PNAS
2003
100
:
13184
-
13189
;
published ahead of print
October 31, 2003
Abstract
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Biological Sciences - Biochemistry
:
Haitao Yang
,
Maojun Yang
,
Yi Ding
,
Yiwei Liu
,
Zhiyong Lou
,
Zhe Zhou
,
Lei Sun
,
Lijuan Mo
,
Sheng Ye
,
Hai Pang
,
George F. Gao
,
Kanchan Anand
,
Mark Bartlam
,
Rolf Hilgenfeld
,
and
Zihe Rao
The crystal structures of severe acute respiratory syndrome virus main protease and its complex with an inhibitor
PNAS
2003
100
:
13190
-
13195
;
published ahead of print
October 29, 2003
,
doi:10.1073/pnas.1835675100
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Biological Sciences - Biochemistry
:
Emily E. Scott
,
You Ai He
,
Michael R. Wester
,
Mark A. White
,
Christopher C. Chin
,
James R. Halpert
,
Eric F. Johnson
,
and
C. David Stout
From the Cover: An open conformation of mammalian cytochrome P450 2B4 at 1.6-Å resolution
PNAS
2003
100
:
13196
-
13201
;
published ahead of print
October 16, 2003
,
doi:10.1073/pnas.2133986100
Abstract
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See commentary article on page
13121
in issue 23 of volume 100
Select this article
Biological Sciences - Biochemistry
:
Daniel Christ
and
Greg Winter
Identification of functional similarities between proteins using directed evolution
PNAS
2003
100
:
13202
-
13206
;
published ahead of print
October 22, 2003
,
doi:10.1073/pnas.2134365100
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Biological Sciences - Biochemistry
:
Albert Sickmann
,
Jörg Reinders
,
Yvonne Wagner
,
Cornelia Joppich
,
René Zahedi
,
Helmut E. Meyer
,
Birgit Schönfisch
,
Inge Perschil
,
Agnieszka Chacinska
,
Bernard Guiard
,
Peter Rehling
,
Nikolaus Pfanner
,
and
Chris Meisinger
The proteome of Saccharomyces cerevisiae mitochondria
PNAS
2003
100
:
13207
-
13212
;
published ahead of print
October 23, 2003
,
doi:10.1073/pnas.2135385100
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Supporting Tables
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Biological Sciences - Biochemistry
:
Yong Li
and
Sidney Altman
A specific endoribonuclease, RNase P, affects gene expression of polycistronic operon mRNAs
PNAS
2003
100
:
13213
-
13218
;
published ahead of print
October 29, 2003
,
doi:10.1073/pnas.2235589100
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Supporting Information
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Biological Sciences - Biochemistry
:
Saskia B. Neher
,
Robert T. Sauer
,
and
Tania A. Baker
Distinct peptide signals in the UmuD and UmuD′ subunits of UmuD/D′ mediate tethering and substrate processing by the ClpXP protease
PNAS
2003
100
:
13219
-
13224
;
published ahead of print
October 31, 2003
,
doi:10.1073/pnas.2235804100
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Biological Sciences - Biochemistry
:
Yuzuru Shiio
and
Robert N. Eisenman
From the Cover: Histone sumoylation is associated with transcriptional repression
PNAS
2003
100
:
13225
-
13230
;
published ahead of print
October 24, 2003
,
doi:10.1073/pnas.1735528100
Abstract
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See commentary article on page
13118
in issue 23 of volume 100
Select this article
Biological Sciences - Biochemistry
:
Markus Eser
and
Michael Ehrmann
SecA-dependent quality control of intracellular protein localization
PNAS
2003
100
:
13231
-
13234
;
published ahead of print
November 3, 2003
,
doi:10.1073/pnas.2234410100
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Biological Sciences - Biochemistry
:
Stéphane Duvezin-Caubet
,
Matthieu Caron
,
Marie-France Giraud
,
Jean Velours
,
and
Jean-Paul di Rago
The two rotor components of yeast mitochondrial ATP synthase are mechanically coupled by subunit δ
PNAS
2003
100
:
13235
-
13240
;
published ahead of print
October 27, 2003
,
doi:10.1073/pnas.2135169100
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Biological Sciences - Biochemistry
:
Tatyana A. Prokhorova
,
Karen Mowrer
,
Catherine H. Gilbert
,
and
Johannes C. Walter
DNA replication of mitotic chromatin in Xenopus egg extracts
PNAS
2003
100
:
13241
-
13246
;
published ahead of print
November 3, 2003
,
doi:10.1073/pnas.2336104100
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Biological Sciences - Biochemistry
:
Edith H. Postel
and
Bozena M. Abramczyk
Escherichia coli nucleoside diphosphate kinase is a uracil-processing DNA repair nuclease
PNAS
2003
100
:
13247
-
13252
;
published ahead of print
October 29, 2003
,
doi:10.1073/pnas.2333230100
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Biological Sciences - Biochemistry - Biophysics
:
Yasser Bustanji
,
Carla Renata Arciola
,
Matteo Conti
,
Enrico Mandello
,
Lucio Montanaro
,
and
Bruno Samorí
Dynamics of the interaction between a fibronectin molecule and a living bacterium under mechanical force
PNAS
2003
100
:
13292
-
13297
;
published ahead of print
October 22, 2003
,
doi:10.1073/pnas.1735343100
Abstract
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Biophysics
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Biological Sciences - Biophysics
:
Wenjun Zheng
and
Sebastian Doniach
A comparative study of motor-protein motions by using a simple elastic-network model
PNAS
2003
100
:
13253
-
13258
;
published ahead of print
October 29, 2003
,
doi:10.1073/pnas.2235686100
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Biological Sciences - Biophysics
:
Nikhil Mittal
,
Elena O. Budrene
,
Michael P. Brenner
,
and
Alexander van Oudenaarden
Motility of Escherichia coli cells in clusters formed by chemotactic aggregation
PNAS
2003
100
:
13259
-
13263
;
published ahead of print
November 3, 2003
,
doi:10.1073/pnas.2233626100
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Biological Sciences - Biophysics
:
Ganesh S. Anand
,
Dennis Law
,
Jeffrey G. Mandell
,
Aaron N. Snead
,
Igor Tsigelny
,
Susan S. Taylor
,
Lynn F. Ten Eyck
,
and
Elizabeth A. Komives
Identification of the protein kinase A regulatory R I α-catalytic subunit interface by amide H/ 2 H exchange and protein docking
PNAS
2003
100
:
13264
-
13269
;
published ahead of print
October 28, 2003
,
doi:10.1073/pnas.2232255100
Abstract
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Biological Sciences - Biophysics
:
Yinan Wei
,
Seho Kim
,
David Fela
,
Jean Baum
,
and
Michael H. Hecht
Solution structure of a de novo protein from a designed combinatorial library
PNAS
2003
100
:
13270
-
13273
;
published ahead of print
October 30, 2003
,
doi:10.1073/pnas.1835644100
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Biological Sciences - Biophysics
:
Julia M. Shifman
and
Stephen L. Mayo
Exploring the origins of binding specificity through the computational redesign of calmodulin
PNAS
2003
100
:
13274
-
13279
;
published ahead of print
November 3, 2003
,
doi:10.1073/pnas.2234277100
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Biological Sciences - Biophysics
:
Ruhong Zhou
Trp-cage: Folding free energy landscape in explicit water
PNAS
2003
100
:
13280
-
13285
;
published ahead of print
October 27, 2003
,
doi:10.1073/pnas.2233312100
Abstract
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Biological Sciences - Biophysics
:
Stefano Gianni
,
Nicholas R. Guydosh
,
Faaizah Khan
,
Teresa D. Caldas
,
Ugo Mayor
,
George W. N. White
,
Mari L. DeMarco
,
Valerie Daggett
,
and
Alan R. Fersht
Unifying features in protein-folding mechanisms
PNAS
2003
100
:
13286
-
13291
;
published ahead of print
October 31, 2003
,
doi:10.1073/pnas.1835776100
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Biological Sciences - Biochemistry - Biophysics
:
Yasser Bustanji
,
Carla Renata Arciola
,
Matteo Conti
,
Enrico Mandello
,
Lucio Montanaro
,
and
Bruno Samorí
Dynamics of the interaction between a fibronectin molecule and a living bacterium under mechanical force
PNAS
2003
100
:
13292
-
13297
;
published ahead of print
October 22, 2003
,
doi:10.1073/pnas.1735343100
Abstract
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Cell Biology
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Biological Sciences - Cell Biology
:
Elena G. Arias-Salgado
,
Sergio Lizano
,
Sugata Sarkar
,
Joan S. Brugge
,
Mark H. Ginsberg
,
and
Sanford J. Shattil
Src kinase activation by direct interaction with the integrin β cytoplasmic domain
PNAS
2003
100
:
13298
-
13302
;
published ahead of print
October 30, 2003
,
doi:10.1073/pnas.2336149100
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Biological Sciences - Cell Biology
:
Natalia Issaeva
,
Assaf Friedler
,
Przemyslaw Bozko
,
Klas G. Wiman
,
Alan R. Fersht
,
and
Galina Selivanova
Rescue of mutants of the tumor suppressor p53 in cancer cells by a designed peptide
PNAS
2003
100
:
13303
-
13307
;
published ahead of print
October 31, 2003
,
doi:10.1073/pnas.1835733100
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Biological Sciences - Cell Biology
:
Diana P. Bratu
,
Byeong-Jik Cha
,
Musa M. Mhlanga
,
Fred Russell Kramer
,
and
Sanjay Tyagi
Visualizing the distribution and transport of mRNAs in living cells
PNAS
2003
100
:
13308
-
13313
;
published ahead of print
October 28, 2003
,
doi:10.1073/pnas.2233244100
Abstract
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Biological Sciences - Cell Biology
:
Nihal Altan-Bonnet
,
Robert D. Phair
,
Roman S. Polishchuk
,
Roberto Weigert
,
and
Jennifer Lippincott-Schwartz
A role for Arf1 in mitotic Golgi disassembly, chromosome segregation, and cytokinesis
PNAS
2003
100
:
13314
-
13319
;
published ahead of print
October 29, 2003
,
doi:10.1073/pnas.2234055100
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Biological Sciences - Cell Biology
:
John T. R. Lawrence
and
Morris J. Birnbaum
ADP-ribosylation factor 6 regulates insulin secretion through plasma membrane phosphatidylinositol 4,5-bisphosphate
PNAS
2003
100
:
13320
-
13325
;
published ahead of print
October 29, 2003
,
doi:10.1073/pnas.2232129100
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Biological Sciences - Cell Biology
:
Benoît Schneider
,
Vincent Mutel
,
Mathéa Pietri
,
Myriam Ermonval
,
Sophie Mouillet-Richard
,
and
Odile Kellermann
NADPH oxidase and extracellular regulated kinases 1/2 are targets of prion protein signaling in neuronal and nonneuronal cells
PNAS
2003
100
:
13326
-
13331
;
published ahead of print
November 3, 2003
,
doi:10.1073/pnas.2235648100
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Biological Sciences - Cell Biology
:
J. L. A. N. Murk
,
B. M. Humbel
,
U. Ziese
,
J. M. Griffith
,
G. Posthuma
,
J. W. Slot
,
A. J. Koster
,
A. J. Verkleij
,
H. J. Geuze
,
and
M. J. Kleijmeer
Endosomal compartmentalization in three dimensions: Implications for membrane fusion
PNAS
2003
100
:
13332
-
13337
;
published ahead of print
November 3, 2003
,
doi:10.1073/pnas.2232379100
Abstract
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Developmental Biology
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Biological Sciences - Developmental Biology
:
Jinsong Zhu
,
Li Chen
,
and
Alexander S. Raikhel
Posttranscriptional control of the competence factor βFTZ-F1 by juvenile hormone in the mosquito Aedes aegypti
PNAS
2003
100