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Proceedings of the National Academy of Sciences of the United States of America
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Table of Contents
October 28, 2003; 100 (22)
Index By Author
Cover Photo
FROM THE COVER
Odor stimulation and single capillary imaging
Atomic force microscopy reveals elusive graphite atoms
Estimating free-energy differences near equilibrium
Measuring the energetic cost of domain movement
Coevolution of coloration and toxicity in frogs
Commentaries
Commentary
:
David E. Wemmer
The energetics of structural change in maltose-binding protein
PNAS
2003
100
:
12529
-
12530
;
published ahead of print
October 20, 2003
,
doi:10.1073/pnas.2335923100
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12700
in issue 22 of volume 100
Commentary
:
Mark C. Hersam
and
Yip-Wah Chung
Detecting elusive surface atoms with atomic force microscopy
PNAS
2003
100
:
12531
-
12532
;
published ahead of print
October 20, 2003
,
doi:10.1073/pnas.2335865100
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See companion article on page
12539
in issue 22 of volume 100
Commentary
:
Kyle Summers
Convergent evolution of bright coloration and toxicity in frogs
PNAS
2003
100
:
12533
-
12534
;
published ahead of print
October 20, 2003
,
doi:10.1073/pnas.2335928100
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12792
in issue 22 of volume 100
Commentary
:
Gordon M. Shepherd
The single capillary and the active brain
PNAS
2003
100
:
12535
-
12536
;
published ahead of print
October 20, 2003
,
doi:10.1073/pnas.2336089100
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13081
in issue 22 of volume 100
Commentary
:
Ronald F. Fox
Using nonequilibrium measurements to determine macromolecule free-energy differences
PNAS
2003
100
:
12537
-
12538
;
published ahead of print
October 20, 2003
,
doi:10.1073/pnas.2336065100
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12564
in issue 22 of volume 100
Physical Sciences
Applied Physical Sciences
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Physical Sciences - Applied Physical Sciences
:
Stefan Hembacher
,
Franz J. Giessibl
,
Jochen Mannhart
,
and
Calvin F. Quate
From the Cover: Revealing the hidden atom in graphite by low-temperature atomic force microscopy
PNAS
2003
100
:
12539
-
12542
;
published ahead of print
September 22, 2003
,
doi:10.1073/pnas.2134173100
Abstract
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See commentary article on page
12531
in issue 22 of volume 100
Chemistry
Select this article
Biological Sciences - Biochemistry - Physical Sciences - Chemistry
:
Elizabeth M. Boon
,
Alison L. Livingston
,
Nikolas H. Chmiel
,
Sheila S. David
,
and
Jacqueline K. Barton
DNA-mediated charge transport for DNA repair
PNAS
2003
100
:
12543
-
12547
;
published ahead of print
October 14, 2003
,
doi:10.1073/pnas.2035257100
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Physical Sciences - Chemistry
:
Michael C. Pirrung
,
Wolfgang H. Pieper
,
Krishna P. Kaliappan
,
and
Mugunthu R. Dhananjeyan
Combinatorial discovery of two-photon photoremovable protecting groups
PNAS
2003
100
:
12548
-
12553
;
published ahead of print
October 13, 2003
,
doi:10.1073/pnas.2131115100
Abstract
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Geology
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Physical Sciences - Geology
:
Fabien Kenig
,
Dirk-Jan H. Simons
,
David Crich
,
James P. Cowen
,
Gregory T. Ventura
,
Tatiana Rehbein-Khalily
,
Todd C. Brown
,
and
Ken B. Anderson
Branched aliphatic alkanes with quaternary substituted carbon atoms in modern and ancient geologic samples
PNAS
2003
100
:
12554
-
12558
;
published ahead of print
October 9, 2003
,
doi:10.1073/pnas.1735581100
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Physical Sciences - Geology - Social Sciences - Anthropology
:
Larry Benson
,
Linda Cordell
,
Kirk Vincent
,
Howard Taylor
,
John Stein
,
G. Lang Farmer
,
and
Kiyoto Futa
Ancient maize from Chacoan great houses: Where was it grown?
PNAS
2003
100
:
13111
-
13115
;
published ahead of print
October 16, 2003
,
doi:10.1073/pnas.2135068100
Abstract
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Mathematics
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Physical Sciences - Mathematics
:
Victor Guillemin
,
Shlomo Sternberg
,
and
Jonathan Weitsman
Signature quantization
PNAS
2003
100
:
12559
-
12560
;
published ahead of print
October 20, 2003
,
doi:10.1073/pnas.1735527100
Abstract
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Physical Sciences - Mathematics
:
Ivan P. Shestakov
and
Ualbai U. Umirbaev
The Nagata automorphism is wild
PNAS
2003
100
:
12561
-
12563
;
published ahead of print
October 20, 2003
,
doi:10.1073/pnas.1735483100
Abstract
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Physics
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Physical Sciences - Physics - Biological Sciences - Biophysics
:
Jeff Gore
,
Felix Ritort
,
and
Carlos Bustamante
From the Cover: Bias and error in estimates of equilibrium free-energy differences from nonequilibrium measurements
PNAS
2003
100
:
12564
-
12569
;
published ahead of print
October 3, 2003
,
doi:10.1073/pnas.1635159100
Abstract
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See commentary article on page
12537
in issue 22 of volume 100
Select this article
Physical Sciences - Physics - Biological Sciences - Biophysics
:
O. Miyashita
,
J. N. Onuchic
,
and
P. G. Wolynes
Nonlinear elasticity, proteinquakes, and the energy landscapes of functional transitions in proteins
PNAS
2003
100
:
12570
-
12575
;
published ahead of print
October 17, 2003
,
doi:10.1073/pnas.2135471100
Abstract
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Supporting Movies
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Physical Sciences - Physics
:
Jian Zi
,
Xindi Yu
,
Yizhou Li
,
Xinhua Hu
,
Chun Xu
,
Xingjun Wang
,
Xiaohan Liu
,
and
Rongtang Fu
Coloration strategies in peacock feathers
PNAS
2003
100
:
12576
-
12578
;
published ahead of print
October 13, 2003
,
doi:10.1073/pnas.2133313100
Abstract
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Statistics
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Physical Sciences - Statistics
:
Manoj Pratim Samanta
and
Shoudan Liang
Predicting protein functions from redundancies in large-scale protein interaction networks
PNAS
2003
100
:
12579
-
12583
;
published ahead of print
October 17, 2003
,
doi:10.1073/pnas.2132527100
Abstract
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Supporting Information
Social Sciences
Anthropology
Select this article
Physical Sciences - Geology - Social Sciences - Anthropology
:
Larry Benson
,
Linda Cordell
,
Kirk Vincent
,
Howard Taylor
,
John Stein
,
G. Lang Farmer
,
and
Kiyoto Futa
Ancient maize from Chacoan great houses: Where was it grown?
PNAS
2003
100
:
13111
-
13115
;
published ahead of print
October 16, 2003
,
doi:10.1073/pnas.2135068100
Abstract
Full Text
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Supporting Information
Biological Sciences
Applied Biological Sciences
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Biological Sciences - Applied Biological Sciences
:
Niharika Nath
,
Khosrow Kashfi
,
Jie Chen
,
and
Basil Rigas
Nitric oxide-donating aspirin inhibits β-catenin/T cell factor (TCF) signaling in SW480 colon cancer cells by disrupting the nuclear β-catenin–TCF association
PNAS
2003
100
:
12584
-
12589
;
published ahead of print
October 17, 2003
,
doi:10.1073/pnas.2134840100
Abstract
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Biochemistry
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Biological Sciences - Biochemistry - Physical Sciences - Chemistry
:
Elizabeth M. Boon
,
Alison L. Livingston
,
Nikolas H. Chmiel
,
Sheila S. David
,
and
Jacqueline K. Barton
DNA-mediated charge transport for DNA repair
PNAS
2003
100
:
12543
-
12547
;
published ahead of print
October 14, 2003
,
doi:10.1073/pnas.2035257100
Abstract
Full Text
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Biological Sciences - Biochemistry
:
Norbert Schülke
,
Olga A. Varlamova
,
Gerald P. Donovan
,
Dangshe Ma
,
Jason P Gardner
,
Donna M. Morrissey
,
Robert R. Arrigale
,
Cenchen Zhan
,
Amy J. Chodera
,
Kenneth G. Surowitz
,
Paul J. Maddon
,
Warren D. W. Heston
,
and
William C. Olson
The homodimer of prostate-specific membrane antigen is a functional target for cancer therapy
PNAS
2003
100
:
12590
-
12595
;
doi:10.1073/pnas.1735443100
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Biological Sciences - Biochemistry
:
P. C. Joost Haasnoot
,
John F. Bol
,
and
René C. L. Olsthoorn
A plant virus replication system to assay the formation of RNA pseudotriloop motifs in RNA–protein interactions
PNAS
2003
100
:
12596
-
12600
;
published ahead of print
October 20, 2003
,
doi:10.1073/pnas.2135413100
Abstract
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Biological Sciences - Biochemistry
:
Brandon E. Aubol
,
Sutapa Chakrabarti
,
Jacky Ngo
,
Jennifer Shaffer
,
Brad Nolen
,
Xiang-Dong Fu
,
Gourisankar Ghosh
,
and
Joseph A. Adams
Processive phosphorylation of alternative splicing factor/splicing factor 2
PNAS
2003
100
:
12601
-
12606
;
published ahead of print
October 10, 2003
,
doi:10.1073/pnas.1635129100
Abstract
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Biological Sciences - Biochemistry
:
Olga Sokolova
,
Alessio Accardi
,
David Gutierrez
,
Adrian Lau
,
Mike Rigney
,
and
Nikolaus Grigorieff
Conformational changes in the C terminus of Shaker K + channel bound to the rat Kvβ2-subunit
PNAS
2003
100
:
12607
-
12612
;
published ahead of print
October 20, 2003
,
doi:10.1073/pnas.2235650100
Abstract
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Biological Sciences - Biochemistry
:
Julio Blanco
,
Roger A. Moore
,
and
Ronald E. Viola
Capture of an intermediate in the catalytic cycle of l -aspartate-β-semialdehyde dehydrogenase
PNAS
2003
100
:
12613
-
12617
;
published ahead of print
October 14, 2003
,
doi:10.1073/pnas.1634958100
Abstract
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Biological Sciences - Biochemistry
:
Stephan Gromer
,
Linda Johansson
,
Holger Bauer
,
L. David Arscott
,
Susanne Rauch
,
David P. Ballou
,
Charles H. Williams, Jr.
,
R. Heiner Schirmer
,
and
Elias S. J. Arnér
Active sites of thioredoxin reductases: Why selenoproteins?
PNAS
2003
100
:
12618
-
12623
;
published ahead of print
October 20, 2003
,
doi:10.1073/pnas.2134510100
Abstract
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Supporting Information
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Biological Sciences - Biochemistry
:
Zhiyuan Hu
,
Seung Hun Cha
,
Shigeru Chohnan
,
and
M. Daniel Lane
Hypothalamic malonyl-CoA as a mediator of feeding behavior
PNAS
2003
100
:
12624
-
12629
;
published ahead of print
October 7, 2003
,
doi:10.1073/pnas.1834402100
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Biological Sciences - Biochemistry
:
Visvanathan Ramamurthy
,
Melanie Roberts
,
Focco van den Akker
,
Gregory Niemi
,
T. A. Reh
,
and
James B. Hurley
AIPL1, a protein implicated in Leber's congenital amaurosis, interacts with and aids in processing of farnesylated proteins
PNAS
2003
100
:
12630
-
12635
;
published ahead of print
October 10, 2003
,
doi:10.1073/pnas.2134194100
Abstract
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Biological Sciences - Biochemistry
:
Siiri E. Iismaa
,
Sara Holman
,
Merridee A. Wouters
,
Laszlo Lorand
,
Robert M. Graham
,
and
Ahsan Husain
Evolutionary specialization of a tryptophan indole group for transition-state stabilization by eukaryotic transglutaminases
PNAS
2003
100
:
12636
-
12641
;
published ahead of print
October 17, 2003
,
doi:10.1073/pnas.1635052100
Abstract
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Biological Sciences - Biochemistry
:
Zhongqiu Zhang
,
Manabu Futamura
,
Haris G. Vikis
,
Min Wang
,
Jie Li
,
Yian Wang
,
Kun-Liang Guan
,
and
Ming You
Positional cloning of the major quantitative trait locus underlying lung tumor susceptibility in mice
PNAS
2003
100
:
12642
-
12647
;
doi:10.1073/pnas.2133947100
Abstract
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Biological Sciences - Biochemistry
:
Hu Pan
,
Sanjay Agarwalla
,
Demetri T. Moustakas
,
Janet Finer-Moore
,
and
Robert M. Stroud
Structure of tRNA pseudouridine synthase TruB and its RNA complex: RNA recognition through a combination of rigid docking and induced fit
PNAS
2003
100
:
12648
-
12653
;
published ahead of print
October 17, 2003
,
doi:10.1073/pnas.2135585100
Abstract
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Biological Sciences - Biochemistry
:
Nikolaus Schiering
,
Stefan Knapp
,
Marina Marconi
,
Maria M. Flocco
,
Jean Cui
,
Rita Perego
,
Luisa Rusconi
,
and
Cinzia Cristiani
Crystal structure of the tyrosine kinase domain of the hepatocyte growth factor receptor c-Met and its complex with the microbial alkaloid K-252a
PNAS
2003
100
:
12654
-
12659
;
published ahead of print
October 14, 2003
,
doi:10.1073/pnas.1734128100
Abstract
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Biological Sciences - Biochemistry
:
Jie Wang
,
Gene Webb
,
Yun Cao
,
and
Donald F. Steiner
Contrasting patterns of expression of transcription factors in pancreatic α and β cells
PNAS
2003
100
:
12660
-
12665
;
published ahead of print
October 13, 2003
,
doi:10.1073/pnas.1735286100
Abstract
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Biological Sciences - Biochemistry
:
Meisheng Zhou
,
Longwen Deng
,
Fatah Kashanchi
,
John N. Brady
,
Aaron J. Shatkin
,
and
Ajit Kumar
The Tat/TAR-dependent phosphorylation of RNA polymerase II C-terminal domain stimulates cotranscriptional capping of HIV-1 mRNA
PNAS
2003
100
:
12666
-
12671
;
published ahead of print
October 20, 2003
,
doi:10.1073/pnas.1835726100
Abstract
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Biophysics
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Physical Sciences - Physics - Biological Sciences - Biophysics
:
Jeff Gore
,
Felix Ritort
,
and
Carlos Bustamante
From the Cover: Bias and error in estimates of equilibrium free-energy differences from nonequilibrium measurements
PNAS
2003
100
:
12564
-
12569
;
published ahead of print
October 3, 2003
,
doi:10.1073/pnas.1635159100
Abstract
Full Text
Full Text (PDF)
Figures Only
See commentary article on page
12537
in issue 22 of volume 100
Select this article
Physical Sciences - Physics - Biological Sciences - Biophysics
:
O. Miyashita
,
J. N. Onuchic
,
and
P. G. Wolynes
Nonlinear elasticity, proteinquakes, and the energy landscapes of functional transitions in proteins
PNAS
2003
100
:
12570
-
12575
;
published ahead of print
October 17, 2003
,
doi:10.1073/pnas.2135471100
Abstract
Full Text
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Supporting Movies
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Biological Sciences - Biophysics
:
Vincent Noireaux
,
Roy Bar-Ziv
,
and
Albert Libchaber
Principles of cell-free genetic circuit assembly
PNAS
2003
100
:
12672
-
12677
;
published ahead of print
October 14, 2003
,
doi:10.1073/pnas.2135496100
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Biological Sciences - Biophysics
:
Jack Schonbrun
and
Ken A. Dill
Fast protein folding kinetics
PNAS
2003
100
:
12678
-
12682
;
published ahead of print
October 20, 2003
,
doi:10.1073/pnas.1735417100
Abstract
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Biological Sciences - Biophysics
:
Sheh-Yi Sheu
,
Dah-Yen Yang
,
H. L. Selzle
,
and
E. W. Schlag
Energetics of hydrogen bonds in peptides
PNAS
2003
100
:
12683
-
12687
;
published ahead of print
October 14, 2003
,
doi:10.1073/pnas.2133366100
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Biological Sciences - Biophysics
:
Christiane A. Opitz
,
Michael Kulke
,
Mark C. Leake
,
Ciprian Neagoe
,
Horst Hinssen
,
Roger J. Hajjar
,
and
Wolfgang A. Linke
Damped elastic recoil of the titin spring in myofibrils of human myocardium
PNAS
2003
100
:
12688
-
12693
;
published ahead of print
October 16, 2003
,
doi:10.1073/pnas.2133733100
Abstract
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Biological Sciences - Biophysics
:
Kylie J. Walters
,
Patrycja J. Lech
,
Amanda M. Goh
,
Qinghua Wang
,
and
Peter M. Howley
DNA-repair protein hHR23a alters its protein structure upon binding proteasomal subunit S5a
PNAS
2003
100
:
12694
-
12699
;
published ahead of print
October 13, 2003
,
doi:10.1073/pnas.1634989100
Abstract
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Biological Sciences - Biophysics
:
Oscar Millet
,
Rhea P. Hudson
,
and
Lewis E. Kay
From the Cover: The energetic cost of domain reorientation in maltose-binding protein as studied by NMR and fluorescence spectroscopy
PNAS
2003
100
:
12700
-
12705
;
published ahead of print
October 6, 2003
,
doi:10.1073/pnas.2134311100
Abstract
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See commentary article on page
12529
in issue 22 of volume 100
Select this article
Biological Sciences - Biophysics
:
José Luis Vázquez-Ibar
,
Lan Guan
,
Maja Svrakic
,
and
H. Ronald Kaback
Exploiting luminescence spectroscopy to elucidate the interaction between sugar and a tryptophan residue in the lactose permease of Escherichia coli
PNAS
2003
100
:
12706
-
12711
;
published ahead of print
October 17, 2003
,
doi:10.1073/pnas.1835645100
Abstract
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Cell Biology
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Biological Sciences - Cell Biology
:
Yang Hong
,
Larry Ackerman
,
Lily Yeh Jan
,
and
Yuh-Nung Jan
Distinct roles of Bazooka and Stardust in the specification of Drosophila photoreceptor membrane architecture
PNAS
2003
100
:
12712
-
12717
;
published ahead of print
October 20, 2003
,